RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 ARHGEF9O43307 516 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 EIF4E2O60573 245 aaKnown RBP9.11□□□□□ -0.95
LDLR-214ENST00000560628 STX11O75558 287 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 PRKD3O94806 890 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 C1QCP02747 245 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 PABPC4LP0CB38 370 aaKnown RBP9.11□□□□□ -0.95
LDLR-214ENST00000560628 UBTFL6P0CB48 400 aaPredicted RBP9.11□□□□□ -0.95
LDLR-214ENST00000560628 DHRS4L1P0CG22 281 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 OR12D1P0DN82 309 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 UBL4AP11441 157 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 HOXB4P17483 251 aaPredicted RBP9.11□□□□□ -0.95
LDLR-214ENST00000560628 FPR1P21462 350 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 ELK4P28324 431 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 ADH6P28332 368 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 SUMO3P55854 103 aaPredicted RBP9.11□□□□□ -0.95
LDLR-214ENST00000560628 NME5P56597 212 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 STX3Q13277 289 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 SMU1Q2TAY7 513 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 ARHGAP11BQ3KRB8 267 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 TMEM201Q5SNT2 666 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 CEP85LQ5SZL2 805 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 SHEQ5VZ18 495 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 TNFAIP8L2Q6P589 184 aaPredicted RBP9.11□□□□□ -0.95
LDLR-214ENST00000560628 FCRLAQ7L513 359 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 C16orf62Q7Z3J2 963 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 HMGN2P46Q86SG4 172 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 TOR1AIP2Q8NFQ8 470 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 RNF128Q8TEB7 428 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 CPNE4Q96A23 557 aaPredicted RBP9.11□□□□□ -0.95
LDLR-214ENST00000560628 ZNF775Q96BV0 537 aaPredicted RBP9.11□□□□□ -0.95
LDLR-214ENST00000560628 PERPQ96FX8 193 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 PLPPR2Q96GM1 343 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 MRGPRX4Q96LA9 322 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 CCL19Q99731 98 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.11□□□□□ -0.95
LDLR-214ENST00000560628 GPR52Q9Y2T5 361 aa9.11□□□□□ -0.95
LDLR-214ENST00000560628 PRSS51A0A1B0GVH4 220 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 TM9SF1O15321 606 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 SCN2BO60939 215 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 BCAS1O75363 584 aaPredicted RBP9.1□□□□□ -0.95
LDLR-214ENST00000560628 UGT2B17O75795 530 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 CSTAP01040 98 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 YES1P07947 543 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 INHBBP09529 407 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 NID1P14543 1247 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 PPP3CBP16298 524 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 LBPP18428 481 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 UQCRC2P22695 453 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 ADSLP30566 484 aaPredicted RBP9.1□□□□□ -0.95
LDLR-214ENST00000560628 SLC7A1P30825 629 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 SESN3P58005 492 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 CBFBQ13951 182 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 RNPS1Q15287 305 aaKnown RBP9.1□□□□□ -0.95
LDLR-214ENST00000560628 ZNF141Q15928 474 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 MAPK14Q16539 360 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 TIGD2Q4W5G0 525 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 SLC25A53Q5H9E4 307 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 BEX5Q5H9J7 111 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 SPANXN4Q5MJ08 99 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 Q5PR19 223 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 ATAD3BQ5T9A4 648 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 ANXA8L1Q5VT79 327 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 ZNF619Q8N2I2 560 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 CIARTQ8N365 385 aaPredicted RBP9.1□□□□□ -0.95
LDLR-214ENST00000560628 ANKRD42Q8N9B4 389 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 OR8J2Q8NGG1 315 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 ZFP90Q8TF47 636 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 S100PBPQ96BU1 408 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 ZG16BQ96DA0 208 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 C18orf12Q96KH6 178 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 ZIM3Q96PE6 472 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 OR5B2Q96R09 309 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 PIP5K1AQ99755 562 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 NMUR2Q9GZQ4 415 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 LAT2Q9GZY6 243 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 COQ10BQ9H8M1 238 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 SSU72Q9NP77 194 aaKnown RBP9.1□□□□□ -0.95
LDLR-214ENST00000560628 FANCFQ9NPI8 374 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 EXD2Q9NVH0 621 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 KLHL13Q9P2N7 655 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 PRR14LQ5THK1 2151 aa9.1□□□□□ -0.95
LDLR-214ENST00000560628 ZFHX3Q15911 3703 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 ARID1AO14497 2285 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 ANKRD28O15084 1053 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 H6PDO95479 791 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 AK1P00568 194 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 ADAP00813 363 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 PSMB1P20618 241 aaKnown RBP9.09□□□□□ -0.95
LDLR-214ENST00000560628 S100A3P33764 101 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 RYKP34925 604 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 CHI3L1P36222 383 aaPredicted RBP9.09□□□□□ -0.95
LDLR-214ENST00000560628 RAC3P60763 192 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 UFM1P61960 85 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 LTBQ06643 244 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 BST1Q10588 318 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 MERTKQ12866 999 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 SELENBP1Q13228 472 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 SKP2Q13309 424 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 CASP8Q14790 479 aa9.09□□□□□ -0.95
LDLR-214ENST00000560628 HHATQ5VTY9 493 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms