RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 TOMM34Q15785 309 aaPredicted RBP4.76□□□□□ -1.65
SPG11-220ENST00000559933 DECR1Q16698 335 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 ZNF791Q3KP31 576 aaPredicted RBP4.76□□□□□ -1.65
SPG11-220ENST00000559933 LIN52Q52LA3 116 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 CRB2Q5IJ48 1285 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 ZNF311Q5JNZ3 666 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 FNDC7Q5VTL7 733 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 SPINK14Q6IE38 97 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 ZCCHC12Q6PEW1 402 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 TUBA3EQ6PEY2 450 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 CBLN3Q6UW01 205 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 DEF8Q6ZN54 512 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 LRRC74BQ6ZQY2 392 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 FKBP9P1Q75LS8 142 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 CCDC80Q76M96 950 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 EIF3MQ7L2H7 374 aaKnown RBP4.76□□□□□ -1.65
SPG11-220ENST00000559933 AMIGO2Q86SJ2 522 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 RPS19BP1Q86WX3 136 aaKnown RBP4.76□□□□□ -1.65
SPG11-220ENST00000559933 CARM1Q86X55 608 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 PROSER1Q86XN7 944 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 MEX3DQ86XN8 651 aaKnown RBP4.76□□□□□ -1.65
SPG11-220ENST00000559933 SLC5A8Q8N695 610 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 TMCO5AQ8N6Q1 288 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 POGLUT1Q8NBL1 392 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 CATSPER1Q8NEC5 780 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 C17orf47Q8NEP4 570 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 OR5L2Q8NGL0 311 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 OR6T1Q8NGN1 323 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 OR8K3Q8NH51 312 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 SLC22A8Q8TCC7 542 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 APOBEC4Q8WW27 367 aaKnown RBP4.76□□□□□ -1.65
SPG11-220ENST00000559933 ASB15Q8WXK1 588 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 EXTL1Q92935 676 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 SPACA9Q96E40 222 aaPredicted RBP4.76□□□□□ -1.65
SPG11-220ENST00000559933 HSPBAP1Q96EW2 488 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 EAF1Q96JC9 268 aaPredicted RBP4.76□□□□□ -1.65
SPG11-220ENST00000559933 RNF145Q96MT1 663 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 BARD1Q99728 777 aaKnown RBP4.76□□□□□ -1.65
SPG11-220ENST00000559933 PKP2Q99959 881 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 G6PC3Q9BUM1 346 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 LHPPQ9H008 270 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 GORASP2Q9H8Y8 452 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 PROK2Q9HC23 129 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 BCL2L10Q9HD36 194 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 DEPPQ9NTK1 212 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 GFOD1Q9NXC2 390 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 SEC14L3Q9UDX4 400 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 ANAPC2Q9UJX6 822 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 POLHQ9Y253 713 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 CFL2Q9Y281 166 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 CARD8Q9Y2G2 431 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 SH3GLB1Q9Y371 365 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 NCKAP5O14513 1909 aa4.76□□□□□ -1.65
SPG11-220ENST00000559933 SYNDIG1LA6NDD5 238 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 SERINC4A6NH21 518 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 SAC3D1A6NKF1 404 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 AQP12BA6NM10 295 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 H0YHG0 523 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 SCDO00767 359 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 FFAR1O14842 300 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 PCDH17O14917 1159 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 ZNHIT1O43257 154 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 SUV39H1O43463 412 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 PIP5K1CO60331 668 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 FADS1O60427 444 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 ANGPTL1O95841 491 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 AGR2O95994 175 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 AK1P00568 194 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 THY1P04216 161 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 DBIP07108 87 aaKnown RBP4.75□□□□□ -1.65
SPG11-220ENST00000559933 IL7RP16871 459 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 IL11P20809 199 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 MST1P26927 711 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 RYKP34925 604 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 ZNF136P52737 540 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 GAS1P54826 345 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 NRG3P56975 720 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 DCAF7P61962 342 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 PMP22Q01453 160 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 RHDQ02161 417 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 OC90Q02509 493 aaPredicted RBP4.75□□□□□ -1.65
SPG11-220ENST00000559933 SKP2Q13309 424 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 FGFBP1Q14512 234 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 OR1C1Q15619 314 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 ZNF141Q15928 474 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 NTRK2Q16620 822 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 NRF1Q16656 503 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 MEP1AQ16819 746 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 IQCCQ4KMZ1 466 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 IFI44LQ53G44 452 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 KLHL26Q53HC5 615 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 MTX3Q5HYI7 312 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 INTS11Q5TA45 600 aaKnown RBP4.75□□□□□ -1.65
SPG11-220ENST00000559933 H3F3CQ6NXT2 135 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 POMZP3Q6PJE2 187 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 DHRS4L2Q6PKH6 230 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 C19orf48Q6RUI8 117 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 TMEM179BQ7Z7N9 219 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 PATL1Q86TB9 770 aaKnown RBP4.75□□□□□ -1.65
SPG11-220ENST00000559933 KRT73Q86Y46 540 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms