RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 RSL1D1O76021 490 aaKnown RBP6.59□□□□□ -1.35
SPG11-213ENST00000558988 RCBTB2O95199 551 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 ANGPTL1O95841 491 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 IL18BPO95998 194 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 IGKV1D-16P01601 117 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 RAF1P04049 648 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 CHRNGP07510 517 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 PEPDP12955 493 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 HPGDP15428 266 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 ZNF708P17019 499 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 SDC1P18827 310 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 GSTM5P46439 218 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 GAS1P54826 345 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 MANFP55145 182 aaKnown RBP6.59□□□□□ -1.35
SPG11-213ENST00000558988 DSCR4P56555 118 aaPredicted RBP6.59□□□□□ -1.35
SPG11-213ENST00000558988 CLDN20P56880 219 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 B3GALT5-AS1P59052 145 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 DNAJB13P59910 316 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 FAM27E3Q08E93 113 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 IFFO1Q0D2I5 559 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 FOXD4Q12950 439 aaPredicted RBP6.59□□□□□ -1.35
SPG11-213ENST00000558988 PCLAFQ15004 111 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 PON3Q15166 354 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 GRAMD1BQ3KR37 738 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 FBXL19-AS1Q494R0 122 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 CCNJQ5T5M9 372 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 MBNL2Q5VZF2 373 aaKnown RBP6.59□□□□□ -1.35
SPG11-213ENST00000558988 PAMR1Q6UXH9 720 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 ZCCHC23Q6ZST2 131 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 IKBIPQ70UQ0 350 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 Q71RC1 249 aaPredicted RBP6.59□□□□□ -1.35
SPG11-213ENST00000558988 TGIF2LYQ8IUE0 185 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 OR2L13Q8N349 312 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 CELF2-AS1Q8N7Q2 184 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 OR2T11Q8NH01 316 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 FNDC9Q8TBE3 224 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 C11orf24Q96F05 449 aaPredicted RBP6.59□□□□□ -1.35
SPG11-213ENST00000558988 PIK3IP1Q96FE7 263 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 PGM2Q96G03 612 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 ZFP3Q96NJ6 502 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 MED18Q9BUE0 208 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 C1orf50Q9BV19 199 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 GATA5Q9BWX5 397 aaPredicted RBP6.59□□□□□ -1.35
SPG11-213ENST00000558988 PRRG4Q9BZD6 226 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 PIGMQ9H3S5 423 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 TMEM185BQ9H7F4 350 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 OXSMQ9NWU1 459 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 FAM120CQ9NX05 1096 aaKnown RBP6.59□□□□□ -1.35
SPG11-213ENST00000558988 GIN1Q9NXP7 522 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 SLC17A7Q9P2U7 560 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 MID2Q9UJV3 735 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 CLEC4AQ9UMR7 237 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 EIF3LQ9Y262 564 aaKnown RBP6.59□□□□□ -1.35
SPG11-213ENST00000558988 ZNF337Q9Y3M9 751 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 SNX8Q9Y5X2 465 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 ANKHD1Q8IWZ3 2542 aaKnown RBP6.58□□□□□ -1.36
SPG11-213ENST00000558988 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 NPIPA5A0A0B4J1W7 369 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 OR2M5A3KFT3 312 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 NPIPA7E9PJI5 369 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 PIP5K1BO14986 540 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 FADS1O60427 444 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 PEX11AO75192 247 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 TNFSF13O75888 250 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 SLU7O95391 586 aaKnown RBP6.58□□□□□ -1.36
SPG11-213ENST00000558988 IL33O95760 270 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 NUDT14O95848 222 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 PLGP00747 810 aaPredicted RBP6.58□□□□□ -1.36
SPG11-213ENST00000558988 ALOX5P09917 674 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 NPIPA8P0DM63 369 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 ACP2P11117 423 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 PRPS2P11908 318 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 POU2F1P14859 743 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 CHMP24386 653 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 ALDH3A1P30838 453 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 CRHR1P34998 444 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 ZNF41P51814 821 aaPredicted RBP6.58□□□□□ -1.36
SPG11-213ENST00000558988 SUCLG1P53597 346 aaKnown RBP6.58□□□□□ -1.36
SPG11-213ENST00000558988 PSMD4P55036 377 aaKnown RBP6.58□□□□□ -1.36
SPG11-213ENST00000558988 CLDN15P56746 228 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 RPL11P62913 178 aaKnown RBP6.58□□□□□ -1.36
SPG11-213ENST00000558988 SORDQ00796 357 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 DAZAP2Q15038 168 aaPredicted RBP6.58□□□□□ -1.36
SPG11-213ENST00000558988 SPDYE7PQ495Y7 208 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 RFTN2Q52LD8 501 aaPredicted RBP6.58□□□□□ -1.36
SPG11-213ENST00000558988 STEAP3Q658P3 488 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 APOOLQ6UXV4 268 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 ZNF550Q7Z398 422 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 ZNF614Q8N883 585 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 COX18Q8N8Q8 333 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 FADS6Q8N9I5 356 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 ATP6V1C2Q8NEY4 427 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 OR7A2PQ8NGA2 310 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 OR4C3Q8NH37 302 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 FAM76AQ8TAV0 307 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 TWIST2Q8WVJ9 160 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 NINJ1Q92982 152 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 NTNG2Q96CW9 530 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 C1GALT1C1Q96EU7 318 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 ZBED6CLQ96FA7 236 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms