RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 YAE1D1Q9NRH1 226 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 RDH8Q9NYR8 311 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 XPO7Q9UIA9 1087 aaKnown RBP2.19□□□□□ -2.06
VPS13C-207ENST00000558919 MOSPD1Q9UJG1 213 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 ANAPC7Q9UJX3 599 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 NEUROG3Q9Y4Z2 214 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 IGKV2-28A0A075B6P5 120 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 TCP11X1B4DZS4 312 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 H3BMQ9 156 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 FCN1O00602 326 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 HCN1O60741 890 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 IGKV2D-28P01615 120 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 OPN1LWP04000 364 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 CA3P07451 260 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 RCC1P18754 421 aaPredicted RBP2.18□□□□□ -2.06
VPS13C-207ENST00000558919 HERVK_113P61574 105 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 CSNK1G2P78368 415 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 PPP2R5CQ13362 524 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 LDLRAP1Q5SW96 308 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 CASC10Q5T4H9 136 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 APTXQ7Z2E3 356 aaKnown RBP2.18□□□□□ -2.06
VPS13C-207ENST00000558919 LHFPL4Q7Z7J7 247 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 ZNF429Q86V71 674 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 MGARPQ8TDB4 240 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 AENQ8WTP8 325 aaKnown RBP2.18□□□□□ -2.06
VPS13C-207ENST00000558919 UCN3Q969E3 161 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 MS4A14Q96JA4 679 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 SAMD8Q96LT4 415 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 TESK2Q96S53 571 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 SLC17A9Q9BYT1 436 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 POLR2J2Q9GZM3 115 aaKnown RBP2.18□□□□□ -2.06
VPS13C-207ENST00000558919 RAB17Q9H0T7 212 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 POLR2J3Q9H1A7 115 aaKnown RBP2.18□□□□□ -2.06
VPS13C-207ENST00000558919 DBNDD1Q9H9R9 158 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 VAT1LQ9HCJ6 419 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 PRPF19Q9UMS4 504 aaKnown RBP2.18□□□□□ -2.06
VPS13C-207ENST00000558919 UGT2A1Q9Y4X1 527 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 OARD1Q9Y530 152 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 CARMIL1Q5VZK9 1371 aa2.18□□□□□ -2.06
VPS13C-207ENST00000558919 TTC21BQ7Z4L5 1316 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 SCN2AQ99250 2005 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 A6NDX4 124 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 GJE1A6NN92 205 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 ANKRD63C9JTQ0 380 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 ZNF780AO75290 641 aaPredicted RBP2.17□□□□□ -2.06
VPS13C-207ENST00000558919 SLITRK3O94933 977 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 TGFAP01135 160 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 MMP1P03956 469 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 STMN1P16949 149 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 COX7A1P24310 79 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 CCNCP24863 283 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 BDKRB1P46663 353 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 SUCLG1P53597 346 aaKnown RBP2.17□□□□□ -2.06
VPS13C-207ENST00000558919 NAPAP54920 295 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 CCDC173Q0VFZ6 552 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 SPP2Q13103 211 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 ARFRP1Q13795 201 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 GPNMBQ14956 572 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 RABGAP1LQ5R372 815 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 FAM199XQ6PEV8 388 aaPredicted RBP2.17□□□□□ -2.06
VPS13C-207ENST00000558919 CENPUQ71F23 418 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 LINC01561Q8N1V8 128 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 Q8N9W7 124 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 FAM210BQ96KR6 192 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 NRIP2Q9BQI9 281 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 SCRT1Q9BWW7 348 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 ZNF385DQ9H6B1 395 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 ECT2Q9H8V3 914 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 ACTR8Q9H981 624 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 AGPAT5Q9NUQ2 364 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 SOHLH2Q9NX45 425 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 ATXN10Q9UBB4 475 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 ZNF223Q9UK11 482 aaPredicted RBP2.17□□□□□ -2.06
VPS13C-207ENST00000558919 PSG11Q9UQ72 335 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 MYO10Q9HD67 2058 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 ABCC9O60706 1549 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 NCAPD2Q15021 1401 aa2.17□□□□□ -2.06
VPS13C-207ENST00000558919 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.16□□□□□ -2.06
VPS13C-207ENST00000558919 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 HELTA6NFD8 242 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 RASGRF2O14827 1237 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 STX7O15400 261 aaKnown RBP2.16□□□□□ -2.06
VPS13C-207ENST00000558919 NBR2O15453 112 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 HCRTR1O43613 425 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 JAK2O60674 1132 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 ZNF324O75467 553 aaPredicted RBP2.16□□□□□ -2.06
VPS13C-207ENST00000558919 UGT2B17O75795 530 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 KLF8O95600 359 aaPredicted RBP2.16□□□□□ -2.06
VPS13C-207ENST00000558919 MT-ND3P03897 115 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 ADSSP30520 456 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 CD80P33681 288 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 PTGFRP43088 359 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 ASMTP46597 345 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 LHX2P50458 406 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 KRTAP10-10P60014 251 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 HSF2Q03933 536 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 RAB40BQ12829 278 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 UNC119Q13432 240 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 LINC01620Q4KN68 170 aa2.16□□□□□ -2.06
VPS13C-207ENST00000558919 DNAJC21Q5F1R6 531 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms