RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 CAB39LQ9H9S4 337 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 SPRR3Q9UBC9 169 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 HPCAL4Q9UM19 191 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 IGHV3-35A0A0C4DH35 117 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 H0Y8G0 127 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 POLR2DO15514 142 aaKnown RBP3.37□□□□□ -1.87
CASC4-206ENST00000558847 RS1O15537 224 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 ECI2O75521 394 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 SURF6O75683 361 aaKnown RBP3.37□□□□□ -1.87
CASC4-206ENST00000558847 LALBAP00709 142 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 IGHDP01880 384 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 CAPN1P07384 714 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 SLC35E2P0CK97 266 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 RNH1P13489 461 aaKnown RBP3.37□□□□□ -1.87
CASC4-206ENST00000558847 CCDC130P13994 396 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 ZP3P21754 424 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 LAP3P28838 519 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 ADORA2BP29275 332 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 EPS15P42566 896 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 SULT1E1P49888 294 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 EFNB2P52799 333 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 RPL23AP62750 156 aaKnown RBP3.37□□□□□ -1.87
CASC4-206ENST00000558847 CXCL6P80162 114 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 ST3GAL3Q11203 375 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 SLC1A5Q15758 541 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 GSG1Q2KHT4 349 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 PAN3Q58A45 887 aaKnown RBP3.37□□□□□ -1.87
CASC4-206ENST00000558847 TCTEX1D4Q5JR98 221 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 ZNF658Q5TYW1 1059 aaPredicted RBP3.37□□□□□ -1.87
CASC4-206ENST00000558847 RUFY3Q7L099 469 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 VSTM4Q8IW00 320 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 SLC38A6Q8IZM9 456 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 LRRC75A-AS1Q8N1F1 130 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 GPD1LQ8N335 351 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 OR13C2Q8NGS9 318 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 PSMG2Q969U7 264 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 FGGYQ96C11 551 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 PELI1Q96FA3 418 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 PAXXQ9BUH6 204 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 C19orf24Q9BVV8 132 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 LRRN3Q9H3W5 708 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 ISG20L2Q9H9L3 353 aaKnown RBP3.37□□□□□ -1.87
CASC4-206ENST00000558847 SLC17A5Q9NRA2 495 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 SMOXQ9NWM0 555 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 APOBEC3BQ9UH17 382 aaKnown RBP3.37□□□□□ -1.87
CASC4-206ENST00000558847 DCDC2Q9UHG0 476 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 CDH9Q9ULB4 789 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 CLEC4AQ9UMR7 237 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 SCML2Q9UQR0 700 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 PDE10AQ9Y233 779 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 NAALAD2Q9Y3Q0 740 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 PPIAL4AQ9Y536 164 aa3.37□□□□□ -1.87
CASC4-206ENST00000558847 LOC100131303A0A0U1RQF7 123 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 K7ENP7 123 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 HCN1O60741 890 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 SCRG1O75711 98 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 GPX5O75715 221 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 CA1P00915 261 aaPredicted RBP3.36□□□□□ -1.87
CASC4-206ENST00000558847 CYP2B6P20813 491 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 ANXA13P27216 316 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 GDF1P27539 372 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 NTSP30990 170 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 EPHX2P34913 555 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 UGT1A3P35503 534 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 RPL13AP40429 203 aaKnown RBP3.36□□□□□ -1.87
CASC4-206ENST00000558847 KIR2DS2P43631 304 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 P2RY1P47900 373 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 AIF1P55008 147 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 ATP5IP56385 69 aaPredicted RBP3.36□□□□□ -1.87
CASC4-206ENST00000558847 ERVPABLB-1P60509 514 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 TIGITQ495A1 244 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 SBK1Q52WX2 424 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 UTF1Q5T230 341 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 VITQ6UXI7 678 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 UTS2BQ765I0 119 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 P2RY8Q86VZ1 359 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 TGIF2LXQ8IUE1 241 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 APOBEC3FQ8IUX4 373 aaKnown RBP3.36□□□□□ -1.87
CASC4-206ENST00000558847 NAXDQ8IW45 347 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 SLC35F2Q8IXU6 374 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 LINC01561Q8N1V8 128 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 GPR137CQ8N3F9 429 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 KIR3DL3Q8N743 410 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 KLHL30-AS1Q8NEE0 82 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 BADQ92934 168 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 SECISBP2Q96T21 854 aaKnown RBP3.36□□□□□ -1.87
CASC4-206ENST00000558847 MCHR1Q99705 422 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 KIR2DL4Q99706 377 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 PARD6BQ9BYG5 372 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 RAB34Q9BZG1 259 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 MIEF1Q9NQG6 463 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 LCMT1Q9UIC8 334 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 COPS3Q9UNS2 423 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 PLLPQ9Y342 182 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 AK6Q9Y3D8 172 aaKnown RBP3.36□□□□□ -1.87
CASC4-206ENST00000558847 USP16Q9Y5T5 823 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 ANKRD30BQ9BXX2 1392 aa3.36□□□□□ -1.87
CASC4-206ENST00000558847 GON4LQ3T8J9 2241 aa3.35□□□□□ -1.87
CASC4-206ENST00000558847 A0A0U1RQS6 177 aa3.35□□□□□ -1.87
CASC4-206ENST00000558847 SRRM5B3KS81 715 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms