RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CARD18P57730 90 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 DSTNP60981 165 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 CHRNEQ04844 493 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 RGNQ15493 299 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 CDSNQ15517 529 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 FBXL19-AS1Q494R0 122 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 SLC25A53Q5H9E4 307 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.64□□□□□ -1.19
TPM1-213ENST00000558400 LRIF1Q5T3J3 769 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 CBLN3Q6UW01 205 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 FRRS1Q6ZNA5 592 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 LIX1LQ8IVB5 337 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 ZNF440Q8IYI8 595 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 UBQLNLQ8IYU4 475 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 LILRA2Q8N149 483 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 ACBD4Q8NC06 268 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 OR5M1Q8NGP8 315 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 REXO5Q96IC2 774 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 RNF145Q96MT1 663 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 THUMPD3Q9BV44 507 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 PRRG4Q9BZD6 226 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 PAIP1Q9H074 479 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 SLC38A1Q9H2H9 487 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 EXOSC3Q9NQT5 275 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 GLRX2Q9NS18 164 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 CLCF1Q9UBD9 225 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 KCNE5Q9UJ90 142 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 LEF1Q9UJU2 399 aaPredicted RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 MCTS1Q9ULC4 181 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 IFT52Q9Y366 437 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 MTORP42345 2549 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 HIVEP1P15822 2718 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 NKX2-6A6NCS4 301 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 FAM90A27PA6NNH2 459 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 C5orf58C9J3I9 102 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 NR5A2O00482 541 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 EIF1AYO14602 144 aaKnown RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 ANGPT2O15123 496 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SEC14L5O43304 696 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 CYP7B1O75881 506 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SYNGR4O95473 234 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 NPPAP01160 153 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SNRPB2P08579 225 aaKnown RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 UBTFL6P0CB48 400 aaPredicted RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 BMP2P12643 396 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 PRKCAP17252 672 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SSTR2P30874 369 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 PGM1P36871 562 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 APOBEC1P41238 236 aaKnown RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 PCYT1AP49585 367 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 CLK1P49759 484 aaKnown RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 ASCL1P50553 236 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 CCR4P51679 360 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 ZNF136P52737 540 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 MVDP53602 400 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 CLDN20P56880 219 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SESN3P58005 492 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 TFF3Q07654 80 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SKP2Q13309 424 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 LARS2Q15031 903 aaKnown RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 QPRTQ15274 297 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 MAPK14Q16539 360 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SYPL1Q16563 259 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 COX20Q5RI15 118 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SLC2A7Q6PXP3 512 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 MEX3BQ6ZN04 569 aaKnown RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 GDF7Q7Z4P5 450 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 DMRTC2Q8IXT2 367 aaPredicted RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 DPP10Q8N608 796 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 TMCO5AQ8N6Q1 288 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 ANKFN1Q8N957 763 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 C9orf106Q8NAJ2 232 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 OR2V1Q8NHB1 315 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 RFWD2Q8NHY2 731 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 FBXO27Q8NI29 283 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 ZNF563Q8TA94 476 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 PNPT1Q8TCS8 783 aaKnown RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 SLC38A5Q8WUX1 472 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SMPDL3BQ92485 455 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 OSTF1Q92882 214 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 RNASE6Q93091 150 aaKnown RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 INTS12Q96CB8 462 aaKnown RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 ZG16BQ96DA0 208 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 C14orf79Q96F83 325 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 THOC1Q96FV9 657 aaKnown RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 POM121Q96HA1 1249 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 KLHL15Q96M94 604 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 TREX2Q9BQ50 279 aaPredicted RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 PINK1Q9BXM7 581 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 BCL2L10Q9HD36 194 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 FANCFQ9NPI8 374 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SLC52A3Q9NQ40 469 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SLC6A13Q9NSD5 602 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 ACER3Q9NUN7 267 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 KCNN3Q9UGI6 736 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 L3MBTL1Q9Y468 752 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 SPIN1Q9Y657 262 aaPredicted RBP7.63□□□□□ -1.19
TPM1-213ENST00000558400 SPG11Q96JI7 2443 aa7.63□□□□□ -1.19
TPM1-213ENST00000558400 ABCA2Q9BZC7 2435 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms