RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 NMNAT2Q9BZQ4 307 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 DDX31Q9H8H2 851 aaKnown RBP13.13□□□□□ -0.31
SPG11-210ENST00000558319 FAM86C1Q9NVL1 165 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 PURGQ9UJV8 347 aaKnown RBP13.13□□□□□ -0.31
SPG11-210ENST00000558319 LMO7Q8WWI1 1683 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 SERPINE2P07093 398 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 VEGFBP49765 207 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 CXADRP78310 365 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 HABP2Q14520 560 aaPredicted RBP13.13□□□□□ -0.31
SPG11-210ENST00000558319 NRARPQ7Z6K4 114 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 NPY6RQ99463 290 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 ALOXE3Q9BYJ1 711 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 DZANK1Q9NVP4 752 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 SLC6A11P48066 632 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 HTRA4P83105 476 aaPredicted RBP13.12□□□□□ -0.31
SPG11-210ENST00000558319 AVPI1Q5T686 147 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 ZNF852Q6ZMS4 543 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 CMTM1Q8IZ96 169 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 GCDHQ92947 438 aaPredicted RBP13.12□□□□□ -0.31
SPG11-210ENST00000558319 RCE1Q9Y256 329 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 PCDHGA1Q9Y5H4 931 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 C21orf33P30042 268 aaPredicted RBP13.12□□□□□ -0.31
SPG11-210ENST00000558319 CPOXP36551 454 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 RPS5P46782 204 aaKnown RBP13.12□□□□□ -0.31
SPG11-210ENST00000558319 HTR6P50406 440 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 CLDN6P56747 220 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 GBX1Q14549 363 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 SLC22A25Q6T423 547 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 OR10K1Q8NGX5 313 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 ARRDC3Q96B67 414 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 IGHV3-64DA0A0J9YX35 117 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 ZNF840PA6NDX5 716 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 PGCP20142 388 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 CLDN8P56748 225 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 ZP2Q05996 745 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 ZNF33BQ06732 778 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 RCAN2Q14206 197 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 TSSK4Q6SA08 328 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 DPPA2Q7Z7J5 298 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 ZNF454Q8N9F8 522 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 OR8J2Q8NGG1 315 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 OR2T4Q8NH00 348 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 BRIX1Q8TDN6 353 aaKnown RBP13.12□□□□□ -0.31
SPG11-210ENST00000558319 MITD1Q8WV92 249 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 VPS25Q9BRG1 176 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 URGCP-MRPS24S4R325 110 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 PRAF2O60831 178 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 APLNRP35414 380 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 RPS18P62269 152 aaKnown RBP13.12□□□□□ -0.31
SPG11-210ENST00000558319 DEFB103AP81534 67 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 RAB31Q13636 194 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 OPCMLQ14982 345 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 INTS14Q96SY0 518 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 PIRO00625 290 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 SNNO75324 88 aaPredicted RBP13.12□□□□□ -0.31
SPG11-210ENST00000558319 JRKO75564 520 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 CHRM4P08173 479 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 SYPP08247 313 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 NTSR1P30989 418 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 ERVK-16P61578 105 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 RPL23AP62750 156 aaKnown RBP13.12□□□□□ -0.31
SPG11-210ENST00000558319 RGNQ15493 299 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 PXDC1Q5TGL8 231 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 KIAA0895LQ68EN5 471 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 IDO2Q6ZQW0 420 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 FJX1Q86VR8 437 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 RELL1Q8IUW5 271 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 TMEM40Q8WWA1 233 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 PDCD1LG2Q9BQ51 273 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 STYXL1Q9Y6J8 313 aa13.12□□□□□ -0.31
SPG11-210ENST00000558319 TRBV11-1A0A0K0K1C0 115 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 RNH1P13489 461 aaKnown RBP13.11□□□□□ -0.31
SPG11-210ENST00000558319 TAS2R38P59533 333 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 TAS2R31P59538 309 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 ERVFC1P60507 584 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 SEC61A1P61619 476 aaKnown RBP13.11□□□□□ -0.31
SPG11-210ENST00000558319 CMPK2Q5EBM0 449 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 ADGRF3Q8IZF5 1079 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 PSD2Q9BQI7 771 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 NTPCRQ9BSD7 190 aaKnown RBP13.11□□□□□ -0.31
SPG11-210ENST00000558319 OSGIN1Q9UJX0 560 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 TRAV27A0A087WT01 109 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 FZD9O00144 591 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 FOXA1P55317 472 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 RPS15AP62244 130 aaKnown RBP13.11□□□□□ -0.31
SPG11-210ENST00000558319 DSC1Q08554 894 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 ZNF425Q6IV72 752 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 RHEBL1Q8TAI7 183 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 DUSP19Q8WTR2 217 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 SFXN2Q96NB2 322 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 GON7Q9BXV9 100 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 SLC19A3Q9BZV2 496 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 ZNF160Q9HCG1 818 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 NIT2Q9NQR4 276 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 PISDQ9UG56 409 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 CBY3A6NI87 242 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 CACNG3O60359 315 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 KCNE1P15382 129 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms