RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 HNRNPCL4P0DMR1 293 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 FCGR2AP12318 317 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 NID1P14543 1247 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 PRKCAP17252 672 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 CCNA2P20248 432 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 CTSSP25774 331 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 ELK4P28324 431 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 AQP1P29972 269 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 UQCRC1P31930 480 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 LSP1P33241 339 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 TIMP3P35625 211 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 PGM1P36871 562 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 ADH7P40394 386 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 TPD52P55327 224 aaPredicted RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 CLDN20P56880 219 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 B3GALT5-AS1P59052 145 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 NCALDP61601 193 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 RAC1P63000 192 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 CDK6Q00534 326 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 SELENBP1Q13228 472 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 SKP2Q13309 424 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 SCARB2Q14108 478 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 TOMM34Q15785 309 aaPredicted RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 BCL2A1Q16548 175 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 TRMT5Q32P41 509 aaKnown RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 SLC25A35Q3KQZ1 300 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 ZNF311Q5JNZ3 666 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 MRPL2Q5T653 305 aaKnown RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 HBMQ6B0K9 141 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 SP5Q6BEB4 398 aaPredicted RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 OR2A2Q6IF42 318 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 REEP3Q6NUK4 255 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 ZNF836Q6ZNA1 936 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 VRK2Q86Y07 508 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 ZNF440Q8IYI8 595 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 GCNT2Q8N0V5 402 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 CADM2Q8N3J6 435 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 C9orf106Q8NAJ2 232 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 RNF217Q8TC41 542 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 GPR119Q8TDV5 335 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 SLC26A7Q8TE54 656 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 TSPEARQ8WU66 669 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 SLC38A5Q8WUX1 472 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 PMM1Q92871 262 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 WNT2BQ93097 391 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 INTS12Q96CB8 462 aaKnown RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 MRGPRX4Q96LA9 322 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 KLHL15Q96M94 604 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 ZNF317Q96PQ6 595 aaPredicted RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 OR5B2Q96R09 309 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 ZNF607Q96SK3 696 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 CGREF1Q99674 301 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 SH3GL1Q99961 368 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 TREX2Q9BQ50 279 aaPredicted RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 SAP130Q9H0E3 1048 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 PIF1Q9H611 641 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 ZNF385DQ9H6B1 395 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 SAR1AQ9NR31 198 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 GID8Q9NWU2 228 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 PAQR5Q9NXK6 330 aaPredicted RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 RPS6KB2Q9UBS0 482 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 KCNE5Q9UJ90 142 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 ZNF443Q9Y2A4 671 aaPredicted RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 IFT52Q9Y366 437 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 PHF3Q92576 2039 aaKnown RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 C7orf72A4D263 438 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 MBD3L4A6NDZ8 208 aaPredicted RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 MBD3L3A6NE82 208 aaPredicted RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 CFAP73A6NFT4 308 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 MBD3L5A6NJ08 208 aaPredicted RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 KDM4EB2RXH2 506 aaPredicted RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 CXCL13O43927 109 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 SERPINB7O75635 380 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 TFPTP0C1Z6 253 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 PABPC4LP0CB38 370 aaKnown RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 CD1EP15812 388 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 ADH6P28332 368 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 GRNP28799 593 aaKnown RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 OPRM1P35372 400 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 CPOXP36551 454 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 IDH2P48735 452 aaKnown RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 SUCLG1P53597 346 aaKnown RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 MVDP53602 400 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 CTBP2P56545 445 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 CARD18P57730 90 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 TMEM176BQ3YBM2 270 aaPredicted RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 RUNDC3AQ59EK9 446 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 ZNF787Q6DD87 383 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 C3orf33Q6P1S2 294 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 ESPNLQ6ZVH7 1005 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 ZNF550Q7Z398 422 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 MTDHQ86UE4 582 aaKnown RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 RETREG3Q86VR2 466 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 MSRB3Q8IXL7 192 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 DPP10Q8N608 796 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 POU5F2Q8N7G0 328 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 C11orf65Q8NCR3 313 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 HIPK4Q8NE63 616 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 OR10A6Q8NH74 314 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 OR10D3Q8NH80 312 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms