RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PLEKHG2Q9H7P9 1386 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 TRBV7-9A0A0J9YWB2 115 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 LOC100506127A0A0U1RQW1 187 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 A0A1B0GWJ7 208 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 TTC26A0AVF1 554 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 ZNF716A6NP11 495 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 LRRIQ3A6PVS8 624 aaPredicted RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 TRIM49D1C9J1S8 452 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 K7ERQ8 282 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 CTAG2O75638 210 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 NOL4O94818 638 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 MFN2O95140 757 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 OR5F1O95221 314 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 OTCP00480 354 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 SERPINA3P01011 423 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 CHRNA1P02708 482 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 HSPB1P04792 205 aaKnown RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 GLAP06280 429 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 HOXB7P09629 217 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 UQCRFS1P1P0C7P4 283 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 ZNF735P0CB33 412 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 THRBP10828 461 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 RALBP11234 206 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 CCDC130P13994 396 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 ZP3P21754 424 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 ANXA13P27216 316 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 MAT2AP31153 395 aaKnown RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 MAGEA1P43355 309 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 KRTAP10-8P60410 259 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 DSTNP60981 165 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 ACTR3P61158 418 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 B2MP61769 119 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 XIAPP98170 497 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 OTUD4Q01804 1114 aaKnown RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 SPIBQ01892 262 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 ASPHQ12797 758 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 PPIL2Q13356 520 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 SNTB2Q13425 540 aaKnown RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 XRCC4Q13426 336 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 IL18R1Q13478 541 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 PDE7AQ13946 482 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 GAMTQ14353 236 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 NCF4Q15080 339 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 AANATQ16613 207 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 NADK2Q4G0N4 442 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 C10orf120Q5SQS8 335 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 CELF3Q5SZQ8 465 aaKnown RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 SPATA46Q5T0L3 261 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 RAET1GQ6H3X3 334 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 OR6B2Q6IFH4 312 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 PMF1Q6P1K2 205 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 DEGS2Q6QHC5 323 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 SCARA5Q6ZMJ2 495 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 KDM7AQ6ZMT4 941 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 DPY19L2P2Q6ZN68 376 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 TIFABQ6ZNK6 161 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 ADGRD2Q7Z7M1 963 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 SYVN1Q86TM6 617 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 TPRA1Q86W33 373 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 SYCE1Q8N0S2 351 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 CEND1Q8N111 149 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 LEMD2Q8NC56 503 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 BHLHE23Q8NDY6 225 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 OR8J1Q8NGP2 316 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 CLHC1Q8NHS4 586 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 ZNF799Q96GE5 643 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 C7orf34Q96L11 122 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 ZNF560Q96MR9 790 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 SECISBP2Q96T21 854 aaKnown RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 COQ7Q99807 217 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 CCT7Q99832 543 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 BBS2Q9BXC9 721 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 FRMD8P1Q9BZ68 369 aaPredicted RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 CRNKL1Q9BZJ0 848 aaKnown RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 POLR1EQ9GZS1 481 aaKnown RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 FAM192AQ9GZU8 254 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 VCX2Q9H322 139 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 ALG9Q9H6U8 611 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 RMND5AQ9H871 391 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 TREM1Q9NP99 234 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.29□□□□□ -2.04
SPG11-206ENST00000558093 ATPIF1Q9UII2 106 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 PURGQ9UJV8 347 aaKnown RBP2.29□□□□□ -2.04
SPG11-206ENST00000558093 DHRS7Q9Y394 339 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 CBY1Q9Y3M2 126 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 FKBP7Q9Y680 259 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 AK9Q5TCS8 1911 aa2.29□□□□□ -2.04
SPG11-206ENST00000558093 DHX29Q7Z478 1369 aaKnown RBP2.28□□□□□ -2.04
SPG11-206ENST00000558093 ERICH2A1L162 156 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 FAM231BA6NCW3 169 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 CFAP73A6NFT4 308 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 NPIPA2E9PIF3 369 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 H0Y8G0 127 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 WRBO00258 174 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 TRDMT1O14717 391 aaKnown RBP2.28□□□□□ -2.04
SPG11-206ENST00000558093 EMC8O43402 210 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 SDC3O75056 442 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 IGSF6O95976 241 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 IGLV1-47P01700 117 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms