RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 DNAJC9Q8WXX5 260 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 EXTL1Q92935 676 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 ZBTB8AQ96BR9 441 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 ARHGAP9Q9BRR9 750 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 C9orf16Q9BUW7 83 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 ZFP64Q9NPA5 681 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 SERINC1Q9NRX5 453 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 QPCTLQ9NXS2 382 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 TAS2R10Q9NYW0 307 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 ENOPH1Q9UHY7 261 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 RIMS3Q9UJD0 308 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 ICAM5Q9UMF0 924 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 SAMHD1Q9Y3Z3 626 aaKnown RBP11.32□□□□□ -0.6
TPM1-209ENST00000558072 MED13Q9UHV7 2174 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 ZFHX4Q86UP3 3567 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 DOCK10Q96BY6 2186 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 CENPVL1A0A0U1RR11 272 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 ARRDC5A6NEK1 342 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 CLDN24A6NM45 220 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 ACOT7O00154 380 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 CHP2O43745 196 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 NME2P1O60361 137 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 NEURL1O76050 574 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 PRSS23O95084 383 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 CCL3P10147 92 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 NME2P22392 152 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 APOBEC1P41238 236 aaKnown RBP11.31□□□□□ -0.6
TPM1-209ENST00000558072 ACAA2P42765 397 aaKnown RBP11.31□□□□□ -0.6
TPM1-209ENST00000558072 TNFSF10P50591 281 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 ZNF136P52737 540 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 DLX5P56178 289 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 ZNF117Q03924 483 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 TAF11Q15544 211 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 NPTX1Q15818 432 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 SNCBQ16143 134 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 INAQ16352 499 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 ZNF766Q5HY98 468 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 DCST1Q5T197 706 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 GRINAQ7Z429 371 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 HMGN2P46Q86SG4 172 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 FADS6Q8N9I5 356 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 MDS2Q8NDY4 140 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 OR10Q1Q8NGQ4 319 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 ADAMTS16Q8TE57 1224 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 LRTOMTQ8WZ04 291 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 NTNG2Q96CW9 530 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 SCMH1Q96GD3 660 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 SLC41A3Q96GZ6 507 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 MRGPRX4Q96LA9 322 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 DHRS1Q96LJ7 313 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 SLC19A3Q9BZV2 496 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 NMNAT1Q9HAN9 279 aaPredicted RBP11.31□□□□□ -0.6
TPM1-209ENST00000558072 ACER3Q9NUN7 267 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 ANKRD10Q9NXR5 420 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 FLRT3Q9NZU0 649 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 CHST2Q9Y4C5 530 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 CPAMD8Q8IZJ3 1885 aa11.31□□□□□ -0.6
TPM1-209ENST00000558072 EXPH5Q8NEV8 1989 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 ELOA3DA6NLF2 546 aaPredicted RBP11.3□□□□□ -0.6
TPM1-209ENST00000558072 CPSF4LA6NMK7 179 aaKnown RBP11.3□□□□□ -0.6
TPM1-209ENST00000558072 G3V2T6 193 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 CASQ2O14958 399 aaPredicted RBP11.3□□□□□ -0.6
TPM1-209ENST00000558072 PEX1O43933 1283 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 TRIM3O75382 744 aaPredicted RBP11.3□□□□□ -0.6
TPM1-209ENST00000558072 EPPINO95925 133 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 IGF2P01344 180 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 PDGFAP04085 211 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 GKN3PP0CG01 181 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 ANXA8P13928 327 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 ZNF23P17027 643 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 TNFRSF1BP20333 461 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 CXCR1P25024 350 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 SRD5A2P31213 254 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 RYKP34925 604 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 PTGDSP41222 190 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 IDH2P48735 452 aaKnown RBP11.3□□□□□ -0.6
TPM1-209ENST00000558072 POLR2HP52434 150 aaKnown RBP11.3□□□□□ -0.6
TPM1-209ENST00000558072 CDH12P55289 794 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 TBR1Q16650 682 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 ST3GAL2Q16842 350 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 ELOA3BQ3SY89 546 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 IQCCQ4KMZ1 466 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 ALG10BQ5I7T1 473 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 ZNF468Q5VIY5 522 aaPredicted RBP11.3□□□□□ -0.6
TPM1-209ENST00000558072 PRAMEF20Q5VT98 475 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 SPINK14Q6IE38 97 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 SHQ1Q6PI26 577 aaKnown RBP11.3□□□□□ -0.6
TPM1-209ENST00000558072 ZNF605Q86T29 641 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 SLC22A16Q86VW1 577 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 CADM2Q8N3J6 435 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 PACRGLQ8N7B6 248 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 ELOA3Q8NG57 546 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 OR2M7Q8NG81 312 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 OR2M3Q8NG83 312 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 GPR119Q8TDV5 335 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 ACOT11Q8WXI4 607 aaPredicted RBP11.3□□□□□ -0.6
TPM1-209ENST00000558072 EME1Q96AY2 570 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 SH3YL1Q96HL8 342 aaPredicted RBP11.3□□□□□ -0.6
TPM1-209ENST00000558072 ALPK1Q96QP1 1244 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 PKP2Q99959 881 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms