RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 TMEM161AQ9NX61 479 aa4.36□□□□□ -1.71
ATXN3-246ENST00000557030 ELOVL2Q9NXB9 296 aa4.36□□□□□ -1.71
ATXN3-246ENST00000557030 FBXL12Q9NXK8 326 aa4.36□□□□□ -1.71
ATXN3-246ENST00000557030 TAS2R9Q9NYW1 312 aa4.36□□□□□ -1.71
ATXN3-246ENST00000557030 IL17CQ9P0M4 197 aa4.36□□□□□ -1.71
ATXN3-246ENST00000557030 ZNF282Q9UDV7 671 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-246ENST00000557030 SEC14L4Q9UDX3 406 aa4.36□□□□□ -1.71
ATXN3-246ENST00000557030 PHF11Q9UIL8 331 aa4.36□□□□□ -1.71
ATXN3-246ENST00000557030 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATXN3-246ENST00000557030 CARD8Q9Y2G2 431 aa4.36□□□□□ -1.71
ATXN3-246ENST00000557030 DLGAP4Q9Y2H0 992 aa4.36□□□□□ -1.71
ATXN3-246ENST00000557030 N6AMT1Q9Y5N5 214 aa4.36□□□□□ -1.71
ATXN3-246ENST00000557030 TANC1Q9C0D5 1861 aa4.36□□□□□ -1.71
ATXN3-246ENST00000557030 GREB1Q4ZG55 1949 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 DOCK4Q8N1I0 1966 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 KCNE1BA0A087WTH5 132 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 IQCMA0A1B0GVH7 501 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 A0A1W2PPH5 198 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 A0A1W2PRQ8 180 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 C4orf47A7E2U8 309 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 SLC25A17O43808 307 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 GUCY1B2O75343 617 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 CCNB2O95067 398 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 SLC25A14O95258 325 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 LGI1O95970 557 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 PTHP01270 115 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 LCATP04180 440 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 GALTP07902 379 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 STSP08842 583 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 HIST1H2AGP0C0S8 130 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 OR56A5P0C7T3 313 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 MPC1LP0DKB6 136 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 IL7P13232 177 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 COX7A2P14406 83 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 AMD1P17707 334 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 GABRB1P18505 474 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 SDC1P18827 310 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 ATF6P18850 670 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 HIST1H2ADP20671 130 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 CYP2A7P20853 494 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 PSMA1P25786 263 aaKnown RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 PTBP1P26599 531 aaKnown RBP eCLIP4.35□□□□□ -1.714e-18■■■■■ 40.6
ATXN3-246ENST00000557030 HLA-DMAP28067 261 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 ERP29P30040 261 aaKnown RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 RRM2P31350 389 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 CSTF2P33240 577 aaKnown RBP eCLIP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 RPL3P39023 403 aaKnown RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 CDKN2CP42773 168 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 RGRP47804 291 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 ARPP19P56211 112 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 AP1S2P56377 157 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 RPP30P78346 268 aaKnown RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 KCNJ10P78508 379 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 SPIBQ01892 262 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 DMPKQ09013 629 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 FCHO2Q0JRZ9 810 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 ST3GAL4Q11206 333 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 PPIGQ13427 754 aaKnown RBP eCLIP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 NFATC2Q13469 925 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 C1DQ13901 141 aaKnown RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 KCNC3Q14003 757 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 DMC1Q14565 340 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 QPRTQ15274 297 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 MICAQ29983 383 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 LRRC26Q2I0M4 334 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 PRICKLE4Q2TBC4 344 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 C18orf21Q32NC0 220 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 IQCCQ4KMZ1 466 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 IFI44LQ53G44 452 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 CCNJQ5T5M9 372 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 GPRC6AQ5T6X5 926 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 ARMC12Q5T9G4 340 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 RNLSQ5VYX0 342 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 LIPJQ5W064 366 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 ZDHHC20Q5W0Z9 365 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 FRG2Q64ET8 278 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 OR4F3Q6IEY1 312 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 NOXRED1Q6NXP6 359 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 FUT10Q6P4F1 479 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 NCEH1Q6PIU2 408 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 PRSS55Q6UWB4 352 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 ZNF621Q6ZSS3 439 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 H1FNTQ75WM6 255 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 CAMKMTQ7Z624 323 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 DNAJB7Q7Z6W7 309 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 VTCN1Q7Z7D3 282 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 NOXA1Q86UR1 476 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 TMEM173Q86WV6 379 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 PTOV1Q86YD1 416 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 PLCZ1Q86YW0 608 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 CCDC71Q8IV32 467 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 TCTE3Q8IZS6 198 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 RBMXL3Q8N7X1 1067 aaKnown RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 GDPD1Q8N9F7 314 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 IL17RCQ8NAC3 791 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 DNAAF1Q8NEP3 725 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 DBF4BQ8NFT6 615 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 CLHC1Q8NHS4 586 aa4.35□□□□□ -1.71
ATXN3-246ENST00000557030 GEMIN6Q8WXD5 167 aaKnown RBP4.35□□□□□ -1.71
ATXN3-246ENST00000557030 SLC7A6Q92536 515 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms