RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 C1QCP02747 245 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
SLIRP-207ENST00000556831 ETFAP13804 333 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 SLC7A1P30825 629 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 UQCRC1P31930 480 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 PEX19P40855 299 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 SLC6A8P48029 635 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 ARFIP2P53365 341 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 GYS2P54840 703 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 CLDN15P56746 228 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 CLDN20P56880 219 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 RAC1P63000 192 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 GUCY1A3Q02108 690 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 CHRNEQ04844 493 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 FUT5Q11128 374 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 FADDQ13158 208 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 FGFBP1Q14512 234 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 PON3Q15166 354 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 QPRTQ15274 297 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 SYPL1Q16563 259 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 COX20Q5RI15 118 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 METTL21CQ5VZV1 264 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 ESPNLQ6ZVH7 1005 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 OLIG3Q7RTU3 272 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 CMIPQ8IY22 773 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 GCNT2Q8N0V5 402 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 ANKFN1Q8N957 763 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 CNEP1R1Q8N9A8 125 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 FBXO27Q8NI29 283 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 INTS12Q96CB8 462 aaKnown RBP12.7□□□□□ -0.38
SLIRP-207ENST00000556831 AURKBQ96GD4 344 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-207ENST00000556831 MRGPRX4Q96LA9 322 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 KLHL15Q96M94 604 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 UCN2Q96RP3 112 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 SPOCK3Q9BQ16 436 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 KLHDC3Q9BQ90 382 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 THUMPD3Q9BV44 507 aaKnown RBP12.7□□□□□ -0.38
SLIRP-207ENST00000556831 SAP130Q9H0E3 1048 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 RASSF4Q9H2L5 321 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 MTHFD2LQ9H903 347 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-207ENST00000556831 SERINC1Q9NRX5 453 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 CLCF1Q9UBD9 225 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 LEF1Q9UJU2 399 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-207ENST00000556831 ICAM5Q9UMF0 924 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 RRP15Q9Y3B9 282 aaKnown RBP12.7□□□□□ -0.38
SLIRP-207ENST00000556831 ZNF175Q9Y473 711 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 PCDHB14Q9Y5E9 798 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 SPIN1Q9Y657 262 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-207ENST00000556831 CSMD2Q7Z408 3487 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 A0A1W2PP18 115 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 TOXO94900 526 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 RCBTB2O95199 551 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 IL18BPO95998 194 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 LINGO3P0C6S8 592 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 SFTPDP35247 375 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 ZNF136P52737 540 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 SELENBP1Q13228 472 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 SKP2Q13309 424 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 LARS2Q15031 903 aaKnown RBP12.69□□□□□ -0.38
SLIRP-207ENST00000556831 TMEM44Q2T9K0 475 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 GTDC1Q4AE62 458 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 LIN52Q52LA3 116 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 HBMQ6B0K9 141 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 LIX1LQ8IVB5 337 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 MCEMP1Q8IX19 187 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 LILRA2Q8N149 483 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 METTL25Q8N6Q8 603 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 NAXEQ8NCW5 288 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 ATP6V1C2Q8NEY4 427 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 OR2V1Q8NHB1 315 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 GPR119Q8TDV5 335 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 ST8SIA1Q92185 356 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 PAIP1Q9H074 479 aaKnown RBP12.69□□□□□ -0.38
SLIRP-207ENST00000556831 SLC6A13Q9NSD5 602 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 FOXD3Q9UJU5 478 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-207ENST00000556831 ZNF232Q9UNY5 417 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 NDUFAF1Q9Y375 327 aa12.69□□□□□ -0.38
SLIRP-207ENST00000556831 APCP25054 2843 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 CENPVL1A0A0U1RR11 272 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 AGAP5A6NIR3 686 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 H0YC42 278 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 TNFSF11O14788 317 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 OIP5O43482 229 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 CRHP06850 196 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 CHRM4P08173 479 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 PABPC4LP0CB38 370 aaKnown RBP12.68□□□□□ -0.38
SLIRP-207ENST00000556831 PRKCAP17252 672 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 CAPN3P20807 821 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 RYKP34925 604 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 AGFG1P52594 562 aaKnown RBP12.68□□□□□ -0.38
SLIRP-207ENST00000556831 TPD52P55327 224 aaPredicted RBP12.68□□□□□ -0.38
SLIRP-207ENST00000556831 KCNJ10P78508 379 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 MERTKQ12866 999 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 MYBPHQ13203 477 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 RGNQ15493 299 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 MAPRE2Q15555 327 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 MAPK14Q16539 360 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 ZSWIM7Q19AV6 140 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 GCNT6Q5T4J0 391 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 C3orf33Q6P1S2 294 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms