RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 NME4O00746 187 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 FRS3O43559 492 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 OPN1SWP03999 348 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 GKN3PP0CG01 181 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 ZNF17P17021 662 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 PRKCAP17252 672 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 POU3F2P20265 443 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-225ENST00000556798 IL11P20809 199 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 CLDN18P56856 261 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 PCBP3P57721 371 aaKnown RBP15.8■□□□□ 0.12
SHMT2-225ENST00000556798 PSME3P61289 254 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 GLYR1Q49A26 553 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-225ENST00000556798 RNF220Q5VTB9 566 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 ENPP6Q6UWR7 440 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 COMTD1Q86VU5 262 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 KRT73Q86Y46 540 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 UBQLNLQ8IYU4 475 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 GTPBP8Q8N3Z3 284 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-225ENST00000556798 RELTQ969Z4 430 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 HOPXQ9BPY8 73 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-225ENST00000556798 PRDM14Q9GZV8 571 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 TMEM185BQ9H7F4 350 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 EXOSC3Q9NQT5 275 aaKnown RBP15.8■□□□□ 0.12
SHMT2-225ENST00000556798 ZNF232Q9UNY5 417 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 MEMO1Q9Y316 297 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 IFT52Q9Y366 437 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 C7orf72A4D263 438 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 KDM4EB2RXH2 506 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-225ENST00000556798 H0Y3Z8 333 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 H0YC42 278 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 SEC14L5O43304 696 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 TPST1O60507 370 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 DNAJA2O60884 412 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 GCM2O75603 506 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-225ENST00000556798 AGFG2O95081 481 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 OPN1LWP04000 364 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 RNF224P0DH78 156 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 ESRRAP11474 423 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-225ENST00000556798 ZNF708P17019 499 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 PGCP20142 388 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 PSMA4P25789 261 aaKnown RBP15.79■□□□□ 0.12
SHMT2-225ENST00000556798 ACVR2AP27037 513 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 TPD52P55327 224 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-225ENST00000556798 LIPEQ05469 1076 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 DMTNQ08495 405 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 KRT72Q14CN4 511 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 GLIPR1L2Q4G1C9 344 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 RTL6Q6ICC9 239 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 ULK2Q8IYT8 1036 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 SMYD1Q8NB12 490 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 OR2T12Q8NG77 320 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 ZNF563Q8TA94 476 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 ZNF607Q96SK3 696 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 SPATA5L1Q9BVQ7 753 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 FAM215AQ9Y5M1 114 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 MED12LQ86YW9 2145 aa15.79■□□□□ 0.12
SHMT2-225ENST00000556798 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 M0QX08 132 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 WDR1O75083 606 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 EPPINO95925 133 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 PEPDP12955 493 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 PRG2P13727 222 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 PRKAR1BP31321 381 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 SLC6A8P48029 635 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 CLDN20P56880 219 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 SESN3P58005 492 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 C1orf185Q5T7R7 199 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 ERICH5Q6P6B1 374 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 POMZP3Q6PJE2 187 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 ARMC8Q8IUR7 673 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 SLC30A8Q8IWU4 369 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 PM20D2Q8IYS1 436 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 MARVELD2Q8N4S9 558 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 FAM26EQ8N5C1 309 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 TAMM41Q96BW9 452 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 CCDC120Q96HB5 630 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 PACSIN3Q9UKS6 424 aa15.78■□□□□ 0.12
SHMT2-225ENST00000556798 CLEC18AA5D8T8 446 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 CFAP73A6NFT4 308 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 E9PLN8 166 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 SERPINB7O75635 380 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 MFN2O95140 757 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 NTN1O95631 604 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 CPN1P15169 458 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 EIF1P41567 113 aaKnown RBP15.77■□□□□ 0.12
SHMT2-225ENST00000556798 IDH2P48735 452 aaKnown RBP15.77■□□□□ 0.12
SHMT2-225ENST00000556798 GSK3BP49841 420 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 SUCLG1P53597 346 aaKnown RBP15.77■□□□□ 0.12
SHMT2-225ENST00000556798 MXRA7P84157 204 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 SLC25A3Q00325 362 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 HOXC5Q00444 222 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 EPS8Q12929 822 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 ACSF3Q4G176 576 aaPredicted RBP15.77■□□□□ 0.12
SHMT2-225ENST00000556798 INTS11Q5TA45 600 aaKnown RBP15.77■□□□□ 0.12
SHMT2-225ENST00000556798 DHRS4L2Q6PKH6 230 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 PLXDC2Q6UX71 529 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 CLEC18BQ6UXF7 455 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 RPTNQ6XPR3 784 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 GGNQ86UU5 652 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 GRAMD2AQ8IUY3 354 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms