RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 ATP6V1C1P21283 382 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 PBLDP30039 288 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-221ENST00000556534 AXLP30530 894 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 OTX2P32243 289 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 CA8P35219 290 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 ACADVLP49748 655 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 CAV2P51636 162 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 KRTAP10-8P60410 259 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 SPIBQ01892 262 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 IL24Q13007 206 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 AANATQ16613 207 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 PDK4Q16654 411 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 LRRC36Q1X8D7 754 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 LINC01620Q4KN68 170 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 ATAD3BQ5T9A4 648 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 OR8G2PQ6IF36 304 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 OR5AU1Q8NGC0 362 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 M1APQ8TC57 530 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 GIPC3Q8TF64 312 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 TRUB1Q8WWH5 349 aaKnown RBP2.99□□□□□ -1.93
SCFD1-221ENST00000556534 NEIL2Q969S2 332 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 VSTM2LQ96N03 204 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 SMIM14Q96QK8 99 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 NICN1Q9BSH3 213 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 EDEM2Q9BV94 578 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 FARSBQ9NSD9 589 aaKnown RBP2.99□□□□□ -1.93
SCFD1-221ENST00000556534 DCAF16Q9NXF7 216 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 ATP6V1HQ9UI12 483 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 HPCAL4Q9UM19 191 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 RNF6Q9Y252 685 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 ASB3Q9Y575 518 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 MAB21L2Q9Y586 359 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 AP4B1Q9Y6B7 739 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 IKBKGQ9Y6K9 419 aa2.99□□□□□ -1.93
SCFD1-221ENST00000556534 LOC100131303A0A0U1RQF7 123 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 SMIM28A0A1B0GU29 152 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 TUBAL3A6NHL2 446 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 CXCL11O14625 94 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 MAGEB3O15480 346 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 HMMRO75330 724 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 MMP23AO75900 390 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 NEBLO76041 1014 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 UFL1O94874 794 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 MFN2O95140 757 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 SNX4O95219 450 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 PRB2P02812 416 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-221ENST00000556534 OPN1MWP04001 364 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 OPN1MW2P0DN77 364 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 OPN1MW3P0DN78 364 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 RPA2P15927 270 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 MDKP21741 143 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-221ENST00000556534 DHPSP49366 369 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-221ENST00000556534 ST3GAL3Q11203 375 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 CHI3L2Q15782 390 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 ZNF311Q5JNZ3 666 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 LANCL3Q6ZV70 420 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 ANKRD37Q7Z713 158 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 ZNF589Q86UQ0 364 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-221ENST00000556534 ZCCHC7Q8N3Z6 543 aaKnown RBP2.98□□□□□ -1.93
SCFD1-221ENST00000556534 STEAP2Q8NFT2 490 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 MARC2Q969Z3 335 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 PINX1Q96BK5 328 aaKnown RBP2.98□□□□□ -1.93
SCFD1-221ENST00000556534 VPS35Q96QK1 796 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 TBCDQ9BTW9 1192 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 MEAF6Q9HAF1 191 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 POLD4Q9HCU8 107 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 MARCH5Q9NX47 278 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 CRLS1Q9UJA2 301 aa2.98□□□□□ -1.93
SCFD1-221ENST00000556534 FAM74A7A6NL05 159 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 ZNF705EA8MWA4 302 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-221ENST00000556534 K7EQM0 130 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 MTX2O75431 263 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 TM7SF2O76062 418 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 IGHV3-48P01763 117 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 OR8U8P0C7N1 319 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 NR2C1P13056 603 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 RPS2P15880 293 aaKnown RBP2.97□□□□□ -1.93
SCFD1-221ENST00000556534 GCFC2P16383 781 aaKnown RBP2.97□□□□□ -1.93
SCFD1-221ENST00000556534 ATP5A1P25705 553 aaKnown RBP2.97□□□□□ -1.93
SCFD1-221ENST00000556534 GCKP35557 465 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 TAGLN2P37802 199 aaKnown RBP2.97□□□□□ -1.93
SCFD1-221ENST00000556534 KIR2DS2P43631 304 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 HLCSP50747 726 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 HMGN5P82970 282 aaKnown RBP2.97□□□□□ -1.93
SCFD1-221ENST00000556534 BDH1Q02338 343 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 LRRC74AQ0VAA2 488 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 SELPLGQ14242 412 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 FAM74A3Q4VXF1 159 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 CFAP157Q5JU67 520 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 EOGTQ5NDL2 527 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 RABGAP1LQ5R372 815 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 PYHIN1Q6K0P9 492 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 SCYL2Q6P3W7 929 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 LRRC70Q7Z2Q7 622 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 ZNF679Q8IYX0 411 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 LINC01561Q8N1V8 128 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 CCDC71LQ8N9Z2 235 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 LINC01555Q8NAE3 123 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 RNF138Q8WVD3 245 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 SDSLQ96GA7 329 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms