RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 TMEM234Q8WY98 164 aa11.28□□□□□ -0.6
SNX6-207ENST00000556303 ST8SIA1Q92185 356 aa11.28□□□□□ -0.6
SNX6-207ENST00000556303 PPP1R36Q96LQ0 422 aa11.28□□□□□ -0.6
SNX6-207ENST00000556303 CCDC115Q96NT0 180 aa11.28□□□□□ -0.6
SNX6-207ENST00000556303 NPAS1Q99742 590 aa11.28□□□□□ -0.6
SNX6-207ENST00000556303 PAIP2Q9BPZ3 127 aaKnown RBP11.28□□□□□ -0.6
SNX6-207ENST00000556303 USB1Q9BQ65 265 aaKnown RBP11.28□□□□□ -0.6
SNX6-207ENST00000556303 TMUB1Q9BVT8 246 aa11.28□□□□□ -0.6
SNX6-207ENST00000556303 HDHD5Q9BXW7 423 aa11.28□□□□□ -0.6
SNX6-207ENST00000556303 PNPOQ9NVS9 261 aa11.28□□□□□ -0.6
SNX6-207ENST00000556303 BEX4Q9NWD9 120 aaPredicted RBP11.28□□□□□ -0.6
SNX6-207ENST00000556303 SLC35A3Q9Y2D2 325 aa11.28□□□□□ -0.6
SNX6-207ENST00000556303 PLEKHA6Q9Y2H5 1048 aa11.28□□□□□ -0.6
SNX6-207ENST00000556303 TMEM120BA0PK00 339 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 UGT2B17O75795 530 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 WDR4P57081 412 aaKnown RBP11.27□□□□□ -0.61
SNX6-207ENST00000556303 PPP2R2AP63151 447 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 PHC1P78364 1004 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 GPR68Q15743 365 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 ZNF239Q16600 458 aaKnown RBP11.27□□□□□ -0.61
SNX6-207ENST00000556303 DEFB113Q30KQ7 82 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 TMEM176BQ3YBM2 270 aaPredicted RBP11.27□□□□□ -0.61
SNX6-207ENST00000556303 SPANXN4Q5MJ08 99 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 PDZK1Q5T2W1 519 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 RNF128Q8TEB7 428 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 ZFP90Q8TF47 636 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 XAGE5Q8WWM1 108 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 PIP5K1AQ99755 562 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 OR51I1Q9H343 314 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 SERHL2Q9H4I8 314 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 SERINC1Q9NRX5 453 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 AIG1Q9NVV5 245 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 NKIRAS1Q9NYS0 192 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 LIPT1Q9Y234 373 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 GPR52Q9Y2T5 361 aa11.27□□□□□ -0.61
SNX6-207ENST00000556303 NPIPA5A0A0B4J1W7 369 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 DEFB108AA8MXU0 73 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 NPIPA7E9PJI5 369 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 SDHDO14521 159 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 KLF11O14901 512 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 EFNA2O43921 213 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 KIAA0513O60268 411 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 FCMRO60667 390 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 PRKD3O94806 890 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 CPSF4O95639 269 aaKnown RBP11.26□□□□□ -0.61
SNX6-207ENST00000556303 CSTAP01040 98 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 IL6P05231 212 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 PGRP06401 933 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 NPIPA8P0DM63 369 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 OR12D1P0DN82 309 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 CD99P14209 185 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 FOSL1P15407 271 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 PGCP20142 388 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 PSMB1P20618 241 aaKnown RBP11.26□□□□□ -0.61
SNX6-207ENST00000556303 AGTR1P30556 359 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 CCKARP32238 428 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 SFTPDP35247 375 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 CHI3L1P36222 383 aaPredicted RBP11.26□□□□□ -0.61
SNX6-207ENST00000556303 KHKP50053 298 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 RPS26P62854 115 aaKnown RBP11.26□□□□□ -0.61
SNX6-207ENST00000556303 SKP2Q13309 424 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 QPRTQ15274 297 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 FAM174BQ3ZCQ3 159 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 TMEM201Q5SNT2 666 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 PPP4R4Q6NUP7 873 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 C3orf33Q6P1S2 294 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 CMIPQ8IY22 773 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 ZNF614Q8N883 585 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 ANKRD42Q8N9B4 389 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 FAM71CQ8NEG0 241 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 SLC25A43Q8WUT9 341 aaPredicted RBP11.26□□□□□ -0.61
SNX6-207ENST00000556303 PIGTQ969N2 578 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 MAELQ96JY0 434 aaKnown RBP11.26□□□□□ -0.61
SNX6-207ENST00000556303 MARK4Q96L34 752 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 TRNT1Q96Q11 434 aaKnown RBP11.26□□□□□ -0.61
SNX6-207ENST00000556303 ZBTB18Q99592 522 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 KLHDC3Q9BQ90 382 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 SLC35A5Q9BS91 424 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 TMEM185BQ9H7F4 350 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 MANSC1Q9H8J5 431 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 EXOSC3Q9NQT5 275 aaKnown RBP11.26□□□□□ -0.61
SNX6-207ENST00000556303 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.26□□□□□ -0.61
SNX6-207ENST00000556303 ACER3Q9NUN7 267 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 KLHL28Q9NXS3 571 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 MARCOQ9UEW3 520 aaPredicted RBP11.26□□□□□ -0.61
SNX6-207ENST00000556303 MKLN1Q9UL63 735 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 WDR45Q9Y484 360 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 GPR45Q9Y5Y3 372 aa11.26□□□□□ -0.61
SNX6-207ENST00000556303 OIP5O43482 229 aa11.25□□□□□ -0.61
SNX6-207ENST00000556303 OPN1LWP04000 364 aa11.25□□□□□ -0.61
SNX6-207ENST00000556303 YES1P07947 543 aa11.25□□□□□ -0.61
SNX6-207ENST00000556303 ALDOCP09972 364 aaKnown RBP11.25□□□□□ -0.61
SNX6-207ENST00000556303 IDO1P14902 403 aa11.25□□□□□ -0.61
SNX6-207ENST00000556303 CD53P19397 219 aa11.25□□□□□ -0.61
SNX6-207ENST00000556303 FPR1P21462 350 aa11.25□□□□□ -0.61
SNX6-207ENST00000556303 SLC7A1P30825 629 aa11.25□□□□□ -0.61
SNX6-207ENST00000556303 PGM1P36871 562 aa11.25□□□□□ -0.61
SNX6-207ENST00000556303 APOBEC1P41238 236 aaKnown RBP11.25□□□□□ -0.61
SNX6-207ENST00000556303 CLK1P49759 484 aaKnown RBP11.25□□□□□ -0.61
SNX6-207ENST00000556303 MAP2K6P52564 334 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms