RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 USP22Q9UPT9 525 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 SHANK1Q9Y566 2161 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 KMT2BQ9UMN6 2715 aaPredicted RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 IGSF10Q6WRI0 2623 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 C7orf72A4D263 438 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 OR14I1A6ND48 311 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 CLDN24A6NM45 220 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 GJE1A6NN92 205 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 AQP7O14520 342 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 ADAM10O14672 748 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 ARPC2O15144 300 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 OIP5O43482 229 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 TPST1O60507 370 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 GCM2O75603 506 aaPredicted RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 CIB2O75838 187 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 PDE5AO76074 875 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 LGI1O95970 557 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 SERPINA1P01009 418 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 IGHG3P01860 377 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 FESP07332 822 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 NCK1P16333 377 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 ZNF17P17021 662 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 HOXB6P17509 224 aaKnown RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 CHMP24386 653 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 FKBP2P26885 142 aaKnown RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 IDH2P48735 452 aaKnown RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 MAP2K6P52564 334 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 MLLT10P55197 1068 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 CASP6P55212 293 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 KCNC4Q03721 635 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 EPS8Q12929 822 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 QPRTQ15274 297 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 SF3B4Q15427 424 aaKnown RBP eCLIP6.93□□□□□ -1.32e-7■■■■■ 32.9
TDP1-214ENST00000556063 DUSP7Q16829 419 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 NDUFAF6Q330K2 333 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 IFI44LQ53G44 452 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 CMPK2Q5EBM0 449 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 COLEC12Q5KU26 742 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 WIPI1Q5MNZ9 446 aaPredicted RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 WBP2NLQ6ICG8 309 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 CBLL1Q75N03 491 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 TRILQ7L0X0 811 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 GRINAQ7Z429 371 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 YTHDF3Q7Z739 585 aaKnown RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 YRDCQ86U90 279 aaKnown RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 SIAH3Q8IW03 269 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 ULK2Q8IYT8 1036 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 ZNF843Q8N446 348 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 FAM156AQ8NDB6 213 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 FAM83FQ8NEG4 500 aaPredicted RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 OR52E4Q8NGH9 312 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 NEIL3Q8TAT5 605 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 GPR119Q8TDV5 335 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 CCDC124Q96CT7 223 aaKnown RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 BARD1Q99728 777 aaKnown RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 SLX1AQ9BQ83 275 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 ZNF559Q9BR84 538 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 TSPAN10Q9H1Z9 355 aaPredicted RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 ACER3Q9NUN7 267 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 DCAF13Q9NV06 445 aaKnown RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 GMPR2Q9P2T1 348 aaKnown RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 TESQ9UGI8 421 aaKnown RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 VDAC3Q9Y277 283 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 NTNG1Q9Y2I2 539 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 RPH3AQ9Y2J0 694 aaPredicted RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 SH3GLB1Q9Y371 365 aa6.93□□□□□ -1.3
TDP1-214ENST00000556063 FAM32AQ9Y421 112 aaKnown RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 SPIN1Q9Y657 262 aaPredicted RBP6.93□□□□□ -1.3
TDP1-214ENST00000556063 WDFY3Q8IZQ1 3526 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 DIDO1Q9BTC0 2240 aaKnown RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 A0A1B0GVC2 190 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 BCKDKO14874 412 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 ZIC3O60481 467 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 FMO6PO60774 539 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 IFNW1P05000 195 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 GKN3PP0CG01 181 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 PEPDP12955 493 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 ABOP16442 354 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 PRKCAP17252 672 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 ITGA2P17301 1181 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 CD247P20963 164 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 TCEA1P23193 301 aaKnown RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 MST1P26927 711 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 ELK4P28324 431 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 PTGS2P35354 604 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 MSX2P35548 267 aaPredicted RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 APOBEC1P41238 236 aaKnown RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 ACAA2P42765 397 aaKnown RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 SLC1A3P43003 542 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 POLR2HP52434 150 aaKnown RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 SESN3P58005 492 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 MERTKQ12866 999 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 FLOT2Q14254 428 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 NRF1Q16656 503 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 ZSCAN26Q16670 478 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 PLPPR5Q32ZL2 321 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 PRR30Q53SZ7 412 aaPredicted RBP6.92□□□□□ -1.3
TDP1-214ENST00000556063 SLC25A53Q5H9E4 307 aa6.92□□□□□ -1.3
TDP1-214ENST00000556063 PDSS1Q5T2R2 415 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms