RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 AENQ8WTP8 325 aaKnown RBP2.15□□□□□ -2.07
SCFD1-216ENST00000555550 PELOQ9BRX2 385 aaKnown RBP2.15□□□□□ -2.07
SCFD1-216ENST00000555550 RSPO3Q9BXY4 272 aaPredicted RBP2.15□□□□□ -2.07
SCFD1-216ENST00000555550 XPO4Q9C0E2 1151 aaKnown RBP2.15□□□□□ -2.07
SCFD1-216ENST00000555550 SLC25A22Q9H936 323 aa2.15□□□□□ -2.07
SCFD1-216ENST00000555550 CNOT2Q9NZN8 540 aaKnown RBP2.15□□□□□ -2.07
SCFD1-216ENST00000555550 PHF11Q9UIL8 331 aa2.15□□□□□ -2.07
SCFD1-216ENST00000555550 NUDCQ9Y266 331 aa2.15□□□□□ -2.07
SCFD1-216ENST00000555550 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-216ENST00000555550 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-216ENST00000555550 H3BMQ9 156 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 DDX39AO00148 427 aaKnown RBP2.14□□□□□ -2.07
SCFD1-216ENST00000555550 SULT2B1O00204 365 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 OR10H3O60404 316 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 KIAA0754O94854 1291 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 OLFM2O95897 454 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 GIPP09681 153 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-216ENST00000555550 CCDC192P0DO97 292 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 ALPPL2P10696 532 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 PDHBP11177 359 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 RNH1P13489 461 aaKnown RBP2.14□□□□□ -2.07
SCFD1-216ENST00000555550 CALB2P22676 271 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 NMT1P30419 496 aaKnown RBP2.14□□□□□ -2.07
SCFD1-216ENST00000555550 RPS9P46781 194 aaKnown RBP2.14□□□□□ -2.07
SCFD1-216ENST00000555550 PLK1P53350 603 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 CHRNB3Q05901 458 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 CCDC173Q0VFZ6 552 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 CHI3L2Q15782 390 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 C1orf146Q5VVC0 180 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 OR52W1Q6IF63 320 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 TPRX1Q8N7U7 411 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 PINX1Q96BK5 328 aaKnown RBP2.14□□□□□ -2.07
SCFD1-216ENST00000555550 RNF185Q96GF1 192 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 OR2M2Q96R28 347 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 RUFY1Q96T51 708 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 TBCDQ9BTW9 1192 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 ACAT2Q9BWD1 397 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 MRPL39Q9NYK5 338 aaKnown RBP2.14□□□□□ -2.07
SCFD1-216ENST00000555550 TREM2Q9NZC2 230 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 AP4B1Q9Y6B7 739 aa2.14□□□□□ -2.07
SCFD1-216ENST00000555550 SCN2AQ99250 2005 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 A0A096LNJ9 63 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 RNF222A6NCQ9 220 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 SLC9B1P1A6NJY1 282 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 GFYI3L273 518 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 SLITRK3O94933 977 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 LALBAP00709 142 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 PLEKP08567 350 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-216ENST00000555550 CLUP10909 449 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 HLA-DPA1P20036 260 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 GABPB1Q06547 395 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-216ENST00000555550 FUT7Q11130 342 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 SLAQ13239 276 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 PDIA5Q14554 519 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 ADPRMQ3LIE5 342 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 LDLRAP1Q5SW96 308 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 APTXQ7Z2E3 356 aaKnown RBP2.13□□□□□ -2.07
SCFD1-216ENST00000555550 PNKDQ8N490 385 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 DQX1Q8TE96 717 aaKnown RBP2.13□□□□□ -2.07
SCFD1-216ENST00000555550 GIPC3Q8TF64 312 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 TMEM158Q8WZ71 300 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 CELF6Q96J87 481 aaKnown RBP2.13□□□□□ -2.07
SCFD1-216ENST00000555550 PGLYRP4Q96LB8 373 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 VSTM2LQ96N03 204 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 RDH8Q9NYR8 311 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 MTRRQ9UBK8 725 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 FETUBQ9UGM5 382 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 ATP6V1HQ9UI12 483 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 ASF1AQ9Y294 204 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 NEUROG3Q9Y4Z2 214 aa2.13□□□□□ -2.07
SCFD1-216ENST00000555550 A0A1B0GWB2 263 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 ESYT2A0FGR8 921 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 KIF2AO00139 706 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-216ENST00000555550 SSX5O60225 188 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 FAM189A1O60320 539 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 RRASP10301 218 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 CYLC1P35663 651 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-216ENST00000555550 MAGEA5P43359 124 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 MADCAM1Q13477 382 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 LAGE3Q14657 143 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 FAM71E1Q6IPT2 247 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 ACP7Q6ZNF0 438 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 ABHD12BQ7Z5M8 362 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-216ENST00000555550 TMEM61Q8N0U2 210 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 LYPD1Q8N2G4 141 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 DUSP18Q8NEJ0 188 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 SLC22A8Q8TCC7 542 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 KCNA7Q96RP8 456 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 CITED1Q99966 193 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 NRIP2Q9BQI9 281 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 SLC30A2Q9BRI3 323 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 HDHD3Q9BSH5 251 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-216ENST00000555550 ANO10Q9NW15 660 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 C6orf203Q9P0P8 240 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-216ENST00000555550 ANGPTL2Q9UKU9 493 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 TBX21Q9UL17 535 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 TP53TG5Q9Y2B4 290 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 ABCC4O15439 1325 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 SLIT3O75094 1523 aa2.12□□□□□ -2.07
SCFD1-216ENST00000555550 IGKV1D-17A0A075B6S4 117 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms