RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ASCL1P50553 236 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 STX1BP61266 288 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 RAC1P63000 192 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 GUSBP1Q15486 140 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 AGKQ53H12 422 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 RPS26P11Q5JNZ5 115 aaPredicted RBP12.27□□□□□ -0.45
SNX6-203ENST00000555416 CHMP1BQ7LBR1 199 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 P4HA3Q7Z4N8 544 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 GDF7Q7Z4P5 450 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 LUZP2Q86TE4 346 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 LILRA2Q8N149 483 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 CNOT9Q92600 299 aaKnown RBP12.27□□□□□ -0.45
SNX6-203ENST00000555416 SPDL1Q96EA4 605 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 SFXN3Q9BWM7 321 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 RSPO3Q9BXY4 272 aaPredicted RBP12.27□□□□□ -0.45
SNX6-203ENST00000555416 SRXN1Q9BYN0 137 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 RMND5AQ9H871 391 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 HHATLQ9HCP6 504 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 UQCRHLA0A096LP55 91 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 A0A096LPI6 279 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 AGAP5A6NIR3 686 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 ETV2O00321 342 aaPredicted RBP12.26□□□□□ -0.45
SNX6-203ENST00000555416 AP3D1O14617 1153 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 ANP32DO95626 131 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 KRT75O95678 551 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 TFPTP0C1Z6 253 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 NR2F1P10589 423 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 NID1P14543 1247 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 KLK2P20151 261 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 RPS4Y1P22090 263 aaKnown RBP12.26□□□□□ -0.45
SNX6-203ENST00000555416 ATP4BP51164 291 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 SESN3P58005 492 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 SIRPAP78324 504 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 SQLEQ14534 574 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 SLC25A53Q5H9E4 307 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 LRRC74BQ6ZQY2 392 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 EIF3MQ7L2H7 374 aaKnown RBP12.26□□□□□ -0.45
SNX6-203ENST00000555416 BTLAQ7Z6A9 289 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 ATP6V1C2Q8NEY4 427 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 OR2V1Q8NHB1 315 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 SLC38A5Q8WUX1 472 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 RNASE6Q93091 150 aaKnown RBP12.26□□□□□ -0.45
SNX6-203ENST00000555416 STARD4Q96DR4 205 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 KLHL15Q96M94 604 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 ZFP3Q96NJ6 502 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 IKZF5Q9H5V7 419 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 COQ10BQ9H8M1 238 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 RNF122Q9H9V4 155 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 CLEC4AQ9UMR7 237 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 LIPT1Q9Y234 373 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 ZNF175Q9Y473 711 aa12.26□□□□□ -0.45
SNX6-203ENST00000555416 GPC6Q9Y625 555 aaPredicted RBP12.26□□□□□ -0.45
SNX6-203ENST00000555416 ANKHD1Q8IWZ3 2542 aaKnown RBP12.25□□□□□ -0.45
SNX6-203ENST00000555416 TRBV5-3A0A0A0MS03 114 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 A0A0G2JND7 137 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 CLIC1O00299 241 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 CGAP01215 116 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 BCHEP06276 602 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 NCF2P19878 526 aaPredicted RBP12.25□□□□□ -0.45
SNX6-203ENST00000555416 RYKP34925 604 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 EIF1P41567 113 aaKnown RBP12.25□□□□□ -0.45
SNX6-203ENST00000555416 EEFSECP57772 596 aaKnown RBP12.25□□□□□ -0.45
SNX6-203ENST00000555416 DSTNP60981 165 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 KCNJ10P78508 379 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 GUCY1A3Q02108 690 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 TLE4Q04727 773 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 CBFBQ13951 182 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 RGNQ15493 299 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 SGCBQ16585 318 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 TMEM176BQ3YBM2 270 aaPredicted RBP12.25□□□□□ -0.45
SNX6-203ENST00000555416 LRIF1Q5T3J3 769 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 HBMQ6B0K9 141 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 VRK2Q86Y07 508 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 CNEP1R1Q8N9A8 125 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 TOR1AIP2Q8NFQ8 470 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 STON2Q8WXE9 905 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 ROBO4Q8WZ75 1007 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 OSTF1Q92882 214 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 MAL2Q969L2 176 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 C14orf79Q96F83 325 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 MRGPRX4Q96LA9 322 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 OPN3Q9H1Y3 402 aaPredicted RBP12.25□□□□□ -0.45
SNX6-203ENST00000555416 ACBD3Q9H3P7 528 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 FGFR1OP2Q9NVK5 253 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 RLIMQ9NVW2 624 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 DNAJB12Q9NXW2 375 aaKnown RBP12.25□□□□□ -0.45
SNX6-203ENST00000555416 GALNT8Q9NY28 637 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 CRIM1Q9NZV1 1036 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 VAPAQ9P0L0 249 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 CHST2Q9Y4C5 530 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 DSPPQ9NZW4 1301 aa12.25□□□□□ -0.45
SNX6-203ENST00000555416 A0A1W2PNR3 127 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 A8MXE2 369 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 SMNDC1O75940 238 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNX6-203ENST00000555416 ME2P23368 584 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 ELK4P28324 431 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 ADH6P28332 368 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 ANXA11P50995 505 aaKnown RBP12.24□□□□□ -0.45
SNX6-203ENST00000555416 RPS3AP61247 264 aaKnown RBP12.24□□□□□ -0.45
SNX6-203ENST00000555416 TXNL4AP83876 142 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms