RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 N4BP1O75113 896 aaKnown RBP4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 CD80P33681 288 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 P2RY4P51582 365 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 KIAA0040Q15053 153 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 TIGITQ495A1 244 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 TMEM225Q6GV28 225 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 TBC1D21Q8IYX1 336 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 MTURNQ8N3F0 131 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 STEAP2Q8NFT2 490 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 OR2T3Q8NH03 318 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 ZPLD1Q8TCW7 415 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 RPL3LQ92901 407 aaKnown RBP4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 VSIG2Q96IQ7 327 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 TUBGCP2Q9BSJ2 902 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 ZSCAN5AQ9BUG6 496 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 TEX13BQ9BXU2 312 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 NXF5Q9H1B4 397 aaKnown RBP4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 ZNF385DQ9H6B1 395 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 PAK1IP1Q9NWT1 392 aaPredicted RBP4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 Q9UF83 564 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 RIMS3Q9UJD0 308 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 VSIG4Q9Y279 399 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 C15orf38-AP3S2A0A0A6YYH1 394 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 IGHV2-70DA0A0C4DH43 119 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 LOC100131303A0A0U1RQF7 123 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 SMIM28A0A1B0GU29 152 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 ZNF254O75437 659 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 SPAG6O75602 509 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 SERF1AO75920 110 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 GIG44P09565 113 aaPredicted RBP4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 STARP49675 285 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 HNMTP50135 292 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 GBX2P52951 348 aaPredicted RBP4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 MXD4Q14582 209 aaPredicted RBP4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 GANABQ14697 944 aaKnown RBP4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 GGTA1PQ4G0N0 100 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 ATF7IP2Q5U623 682 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 LIPNQ5VXI9 398 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 MOB1BQ7L9L4 216 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 OR52M1Q8NGK5 317 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 FBXO30Q8TB52 745 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 AMDHD1Q96NU7 426 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 NT5C3AQ9H0P0 336 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 TNFRSF19Q9NS68 423 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 VNN3Q9NY84 501 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 OR1A1Q9P1Q5 309 aa4.01□□□□□ -1.77
CKS1BP1-201ENST00000555221 ARAP1Q96P48 1450 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 TMEM110-MUSTN1A8MSY1 372 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 G3V4G9 280 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 CA1P00915 261 aaPredicted RBP4□□□□□ -1.77
CKS1BP1-201ENST00000555221 GLRA2P23416 452 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 EPHX2P34913 555 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 GCKP35557 465 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
CKS1BP1-201ENST00000555221 CCDC152Q4G0S7 254 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 OR2B11Q5JQS5 317 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 SPATA46Q5T0L3 261 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 RSBN1Q5VWQ0 802 aaPredicted RBP4□□□□□ -1.77
CKS1BP1-201ENST00000555221 KCNIP4Q6PIL6 250 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 DNM1P46Q6ZS02 220 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 FRA10AC1Q70Z53 315 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 TMEM110Q86TL2 294 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 TPRA1Q86W33 373 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 OR51G2Q8NGK0 314 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 OR2A12Q8NGT7 310 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 SLC5A11Q8WWX8 675 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 FGGYQ96C11 551 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 CELF6Q96J87 481 aaKnown RBP4□□□□□ -1.77
CKS1BP1-201ENST00000555221 CYP2S1Q96SQ9 504 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 NAT10Q9H0A0 1025 aaKnown RBP4□□□□□ -1.77
CKS1BP1-201ENST00000555221 PIPOXQ9P0Z9 390 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 TBK1Q9UHD2 729 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 PCSK1NQ9UHG2 260 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 RASD1Q9Y272 281 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 ADAMTS12P58397 1594 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 CLASP1Q7Z460 1538 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 ABCA7Q8IZY2 2146 aa4□□□□□ -1.77
CKS1BP1-201ENST00000555221 FMN1Q68DA7 1419 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 UACAQ9BZF9 1416 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 IGLV3-10A0A075B6K4 115 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 TBL1XO60907 577 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 MTX2O75431 263 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 CCDC166P0CW27 439 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 CYP2B6P20813 491 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 HNF1AP20823 631 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 VDAC1P21796 283 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 YWHABP31946 246 aaKnown RBP3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 KIR2DS2P43631 304 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 SLC26A2P50443 739 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 ARFIP1P53367 373 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 IGLV3-21P80748 117 aaPredicted RBP3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 SLC10A7Q0GE19 358 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 GPM6BQ13491 265 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 PDK3Q15120 406 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 C10orf120Q5SQS8 335 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 WSCD1Q658N2 575 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 FAM199XQ6PEV8 388 aaPredicted RBP3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 TFAP2EQ6VUC0 442 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 RGS9BPQ6ZS82 235 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 ZNF677Q86XU0 584 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms