RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 HIST1H2AGP0C0S8 130 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 HIST1H2ADP20671 130 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 MTNR1AP48039 350 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 EFNA3P52797 238 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 PSG6Q00889 435 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 IL5RAQ01344 420 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SPIBQ01892 262 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 STX4Q12846 297 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 RUNX2Q13950 521 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 FAM53BQ14153 422 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SYPL1Q16563 259 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 STPG1Q5TH74 334 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SLC6A19Q695T7 634 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 PYHIN1Q6K0P9 492 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 NPSR1Q6W5P4 371 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 PRSS42Q7Z5A4 293 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 RBM45Q8IUH3 476 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ELMOD2Q8IZ81 293 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ACOT4Q8N9L9 421 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 OR5AR1Q8NGP9 310 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 OR8D1Q8WZ84 308 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SMARCD2Q92925 531 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ERLEC1Q96DZ1 483 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 RNFT2Q96EX2 444 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 C1orf147Q96MC9 270 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SFXN2Q96NB2 322 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 HIST1H2AJQ99878 128 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 DHRS9Q9BPW9 319 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 H2AFJQ9BTM1 129 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 HDHD5Q9BXW7 423 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ACTR6Q9GZN1 396 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 TMEM168Q9H0V1 697 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SLC26A1Q9H2B4 701 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 TP63Q9H3D4 680 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 OSGEPL1Q9H4B0 414 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 RIBC2Q9H4K1 309 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ZDHHC4Q9NPG8 344 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ATP13A2Q9NQ11 1180 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 HINT3Q9NQE9 182 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 TMEM74BQ9NUR3 256 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 GIMAP4Q9NUV9 329 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 POT1Q9NUX5 634 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 BABAM2Q9NXR7 383 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 TNFRSF10DQ9UBN6 386 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 POMT2Q9UKY4 750 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 TRABD2BA6NFA1 517 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 H0YIG0 161 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 H3BUI4 141 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 P2RX6O15547 441 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 POP7O75817 140 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 LRATO95237 230 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ALDOBP05062 364 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SBK2P0C263 348 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 EPXP11678 715 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 RPL17P18621 184 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SOX6P35712 828 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 IL12RB1P42701 662 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 CCT3P49368 545 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 GBX2P52951 348 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 TPTEP56180 551 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 P2RX3P56373 397 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 MRPS21P82921 87 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 EGR4Q05215 589 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 NAE1Q13564 534 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 NFATC4Q14934 902 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ARHGEF6Q15052 776 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 RPS6KA2Q15349 733 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 CPSF6Q16630 551 aaKnown RBP eCLIP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 LY6G5CQ5SRR4 150 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 HIST2H2AA3Q6FI13 130 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 FAAH2Q6GMR7 532 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 RGS7BPQ6MZT1 257 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 RPL22L1Q6P5R6 122 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 PSRC1Q6PGN9 363 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 FAM198BQ6UWH4 519 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 C5orf46Q6UWT4 87 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 GSG1LQ6UXU4 331 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 AHSA2Q719I0 299 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 TRMT1LQ7Z2T5 733 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 C9orf40Q8IXQ3 194 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SNX33Q8WV41 574 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 AUTS2Q8WXX7 1259 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 PNPLA2Q96AD5 504 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 CAPNS2Q96L46 248 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 KLHL15Q96M94 604 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 KCTD7Q96MP8 289 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 DERL3Q96Q80 235 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 IER2Q9BTL4 223 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 FAIM2Q9BWQ8 316 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 EBPLQ9BY08 206 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 NLNQ9BYT8 704 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 NUAK2Q9H093 628 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 GPBP1L1Q9HC44 474 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 DLL4Q9NR61 685 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SLC35A3Q9Y2D2 325 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ATG4BQ9Y4P1 393 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SPIN1Q9Y657 262 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 IGLV1-36A0A0B4J1U3 117 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 NCF1BA6NI72 391 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 OR2AG2A6NM03 316 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms