RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 LINGO3P0C6S8 592 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 PRKCAP17252 672 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 PGCP20142 388 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 IL11P20809 199 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 RYKP34925 604 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 PEX19P40855 299 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 KCNJ5P48544 419 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 CTBP2P56545 445 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 KRTAP10-9P60411 292 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 EEF1A1P68104 462 aaKnown RBP9.58□□□□□ -0.88
SHMT2-213ENST00000554600 CHRNEQ04844 493 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 FUT5Q11128 374 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 FGFBP1Q14512 234 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 QPRTQ15274 297 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 MAPK14Q16539 360 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 SYPL1Q16563 259 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 TMEM176BQ3YBM2 270 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-213ENST00000554600 FBXL19-AS1Q494R0 122 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 GTDC1Q4AE62 458 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 COX20Q5RI15 118 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 EEF1A1P5Q5VTE0 462 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 FBXW10Q5XX13 1052 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 VWA1Q6PCB0 445 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 FRRS1Q6ZNA5 592 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 MSANTD1Q6ZTZ1 278 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 ESPNLQ6ZVH7 1005 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 METTL25Q8N6Q8 603 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 OR2V1Q8NHB1 315 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 ZNF563Q8TA94 476 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 AURKBQ96GD4 344 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-213ENST00000554600 CCDC28BQ9BUN5 200 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 LAT2Q9GZY6 243 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 QRSL1Q9H0R6 528 aaKnown RBP9.58□□□□□ -0.88
SHMT2-213ENST00000554600 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-213ENST00000554600 SLC6A13Q9NSD5 602 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 PAQR5Q9NXK6 330 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-213ENST00000554600 GALNT8Q9NY28 637 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 CRIM1Q9NZV1 1036 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 CLEC4AQ9UMR7 237 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 LIPT1Q9Y234 373 aa9.58□□□□□ -0.88
SHMT2-213ENST00000554600 PDZD2O15018 2839 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 PRAMEF27A3QJZ7 478 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 TMEM247A6NEH6 219 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 TNFSF13O75888 250 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 AQP8O94778 261 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 ETFAP13804 333 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 NCF2P19878 526 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-213ENST00000554600 PSMA4P25789 261 aaKnown RBP9.57□□□□□ -0.88
SHMT2-213ENST00000554600 ELK4P28324 431 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 ADH6P28332 368 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 SHC1P29353 583 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 SLC7A1P30825 629 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 CARD18P57730 90 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 DSTNP60981 165 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 TXNL4AP83876 142 aaKnown RBP9.57□□□□□ -0.88
SHMT2-213ENST00000554600 MERTKQ12866 999 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 SKP2Q13309 424 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 GNA13Q14344 377 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 AGKQ53H12 422 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 SLC2A7Q6PXP3 512 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 LRRC74BQ6ZQY2 392 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 BTLAQ7Z6A9 289 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 LINC01560Q8TB33 94 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 ZFP90Q8TF47 636 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 WDR60Q8WVS4 1066 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 TMEM234Q8WY98 164 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 ROBO4Q8WZ75 1007 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 OSTF1Q92882 214 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 ZG16BQ96DA0 208 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 MRGPRX4Q96LA9 322 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 TRNT1Q96Q11 434 aaKnown RBP9.57□□□□□ -0.88
SHMT2-213ENST00000554600 OPN3Q9H1Y3 402 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-213ENST00000554600 TPT1P8Q9HAU6 139 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 CACYBPQ9HB71 228 aaKnown RBP9.57□□□□□ -0.88
SHMT2-213ENST00000554600 NPHS2Q9NP85 383 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 TIGARQ9NQ88 270 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 CCDC167Q9P0B6 97 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 P2RX2Q9UBL9 471 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 DCTN4Q9UJW0 460 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 ITGB1BP2Q9UKP3 347 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 PROCRQ9UNN8 238 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 SLC35A3Q9Y2D2 325 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 EMC9Q9Y3B6 208 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 MED13LQ71F56 2210 aa9.57□□□□□ -0.88
SHMT2-213ENST00000554600 DSCAMO60469 2012 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 CLDN24A6NM45 220 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 A8MXE2 369 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 MSTNO14793 375 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 BCHEP06276 602 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 CHRM4P08173 479 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 ZCCHC18P0CG32 403 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 TFPIP10646 304 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 IL7RP16871 459 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 CAPN3P20807 821 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 SLC6A8P48029 635 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 SESN3P58005 492 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 KCNJ10P78508 379 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 SELENBP1Q13228 472 aa9.56□□□□□ -0.88
SHMT2-213ENST00000554600 EXOC3L2Q2M3D2 409 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms