RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 COX18Q8N8Q8 333 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 FAM13CQ8NE31 585 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 FAM110BQ8TC76 370 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 SPPL2AQ8TCT8 520 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 GPR151Q8TDV0 419 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 OIT3Q8WWZ8 545 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 DIO2Q92813 273 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 TMBIM1Q969X1 311 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 ROPN1LQ96C74 230 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 TMCO6Q96DC7 493 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 OMA1Q96E52 524 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 C16orf58Q96GQ5 468 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 TMEM41AQ96HV5 264 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 JSRP1Q96MG2 331 aaPredicted RBP6.97□□□□□ -1.29
ABCD4-220ENST00000553998 COL21A1Q96P44 957 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 GNRHR2Q96P88 292 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 OR7D2Q96RA2 312 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 CGREF1Q99674 301 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 SH3GL1Q99961 368 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 TUBA1CQ9BQE3 449 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 G6PC3Q9BUM1 346 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 BTBD2Q9BX70 525 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 HHATLQ9HCP6 504 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 POLE3Q9NRF9 147 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 SLC6A13Q9NSD5 602 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 EXD2Q9NVH0 621 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 GID8Q9NWU2 228 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 ZNF226Q9NYT6 803 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 SLC25A37Q9NYZ2 338 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 SLAMF8Q9P0V8 285 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 CLCF1Q9UBD9 225 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 PACSIN3Q9UKS6 424 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 LIPT1Q9Y234 373 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 PCDHB14Q9Y5E9 798 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 ARID1AO14497 2285 aa6.97□□□□□ -1.29
ABCD4-220ENST00000553998 SONP18583 2426 aaKnown RBP6.96□□□□□ -1.3
ABCD4-220ENST00000553998 GXYLT2A0PJZ3 443 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 EVPLLA8MZ36 301 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 TSPAN2O60636 221 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 UGT2B11O75310 529 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 NME6O75414 186 aaPredicted RBP6.96□□□□□ -1.3
ABCD4-220ENST00000553998 KCNK2O95069 426 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 NGFRP08138 427 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 OR12D1P0DN82 309 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 BMP2P12643 396 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 CYP4B1P13584 511 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 GPX2P18283 190 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 ATP6V1C1P21283 382 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 IL12BP29460 328 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 CPA2P48052 419 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 MNAT1P51948 309 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 RPS26P62854 115 aaKnown RBP6.96□□□□□ -1.3
ABCD4-220ENST00000553998 DMTNQ08495 405 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 FAM27E3Q08E93 113 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 SNTA1Q13424 505 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 TNK1Q13470 666 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 GNA13Q14344 377 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 RGNQ15493 299 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 EIPR1Q53HC9 387 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 RUNDC3AQ59EK9 446 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 WIPI1Q5MNZ9 446 aaPredicted RBP6.96□□□□□ -1.3
ABCD4-220ENST00000553998 DCST2Q5T1A1 773 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 TIGD3Q6B0B8 471 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 TNFAIP8L2Q6P589 184 aaPredicted RBP6.96□□□□□ -1.3
ABCD4-220ENST00000553998 ANGPTL8Q6UXH0 198 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 HACD2Q6Y1H2 254 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 PLEKHM3Q6ZWE6 761 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 ARPINQ7Z6K5 226 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 PACS2Q86VP3 889 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 TREML1Q86YW5 311 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 MED12LQ86YW9 2145 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 PRR22Q8IZ63 422 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 CLEC4FQ8N1N0 589 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 METTL25Q8N6Q8 603 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 OR4N2Q8NGD1 307 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 OR8J3Q8NGG0 315 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 PIK3R3Q92569 461 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 PMM1Q92871 262 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 HGDQ93099 445 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 STARD4Q96DR4 205 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 ANKRD27Q96NW4 1050 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 TRNT1Q96Q11 434 aaKnown RBP6.96□□□□□ -1.3
ABCD4-220ENST00000553998 ADOQ96SZ5 270 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 ZNF350Q9GZX5 532 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 HOXD1Q9GZZ0 328 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 OR51I1Q9H343 314 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 SERHL2Q9H4I8 314 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 UBTD1Q9HAC8 227 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 EFCAB1Q9HAE3 211 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 VAPAQ9P0L0 249 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.96□□□□□ -1.3
ABCD4-220ENST00000553998 TAGLN3Q9UI15 199 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 ABCG2Q9UNQ0 655 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 AP3M1Q9Y2T2 418 aa6.96□□□□□ -1.3
ABCD4-220ENST00000553998 A0A1W2PNV4 684 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 TMEM247A6NEH6 219 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 FXYD1O00168 92 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 HMGN4O00479 90 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 HCRTR2O43614 444 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 TNFRSF21O75509 655 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms