RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 RNH1P13489 461 aaKnown RBP1.99□□□□□ -2.09
VRK1-202ENST00000553683 IL10P22301 178 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 AQP1P29972 269 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 MAGEA8P43361 318 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 TNNT2P45379 298 aaPredicted RBP1.99□□□□□ -2.09
VRK1-202ENST00000553683 ASMTP46597 345 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 APOC4P55056 127 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 CSTF1Q05048 431 aaKnown RBP1.99□□□□□ -2.09
VRK1-202ENST00000553683 TMED1Q13445 227 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 LIPNQ5VXI9 398 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 UNC5DQ6UXZ4 953 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 SNX32Q86XE0 403 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 CBWD2Q8IUF1 395 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 ELMOD2Q8IZ81 293 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 ZNF786Q8N393 782 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 TEX9Q8N6V9 391 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 ZNF713Q8N859 430 aaPredicted RBP1.99□□□□□ -2.09
VRK1-202ENST00000553683 AENQ8WTP8 325 aaKnown RBP1.99□□□□□ -2.09
VRK1-202ENST00000553683 DCUN1D4Q92564 292 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 MBOAT4Q96T53 435 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 TBCDQ9BTW9 1192 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 DUSP16Q9BY84 665 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 NXF3Q9H4D5 531 aaKnown RBP1.99□□□□□ -2.09
VRK1-202ENST00000553683 ZNF385DQ9H6B1 395 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 NANSQ9NR45 359 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 B3GNT2Q9NY97 397 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 TBK1Q9UHD2 729 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 ATP6V1HQ9UI12 483 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 FOXJ3Q9UPW0 622 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 PLLPQ9Y342 182 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 NEUROG3Q9Y4Z2 214 aa1.99□□□□□ -2.09
VRK1-202ENST00000553683 KIF16BQ96L93 1317 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 ZNFX1Q9P2E3 1918 aaKnown RBP1.98□□□□□ -2.09
VRK1-202ENST00000553683 TRBV6-6A0A0A6YYG2 114 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 IGKV6-21A0A0C4DH24 114 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 SPRR5A0A1B0GTR4 108 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 FAM230AA0A1W2PPH8 454 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 A8MUA0 341 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 NPIPB7O75200 414 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 TOM1L1O75674 476 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 UGT2B17O75795 530 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 MT-ATP6P00846 226 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 OAS2P29728 719 aaKnown RBP1.98□□□□□ -2.09
VRK1-202ENST00000553683 RBMXP38159 391 aaKnown RBP1.98□□□□□ -2.09
VRK1-202ENST00000553683 SUCLG1P53597 346 aaKnown RBP1.98□□□□□ -2.09
VRK1-202ENST00000553683 SLC26A5P58743 744 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 PFN3P60673 137 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 RGS1Q08116 209 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 ST3GAL3Q11203 375 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 ATXN7L3Q14CW9 347 aaPredicted RBP1.98□□□□□ -2.09
VRK1-202ENST00000553683 ADPRMQ3LIE5 342 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 LRRC8BQ6P9F7 803 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 PP632Q6XCG6 107 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 LANCL3Q6ZV70 420 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 ARCQ7LC44 396 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 VRK2Q86Y07 508 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 FAM71E2Q8N5Q1 922 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 ARIH2OSQ8N7S6 290 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 MRPL43Q8N983 215 aaKnown RBP1.98□□□□□ -2.09
VRK1-202ENST00000553683 MDS2Q8NDY4 140 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 OR2T33Q8NG76 320 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 UCN3Q969E3 161 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 IL22RA2Q969J5 263 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 OR5B2Q96R09 309 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 NRIP2Q9BQI9 281 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 RNF126Q9BV68 326 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 MAGT1Q9H0U3 335 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 RWDD1Q9H446 243 aaPredicted RBP1.98□□□□□ -2.09
VRK1-202ENST00000553683 PAK1IP1Q9NWT1 392 aaPredicted RBP1.98□□□□□ -2.09
VRK1-202ENST00000553683 RABL2AQ9UBK7 228 aaPredicted RBP1.98□□□□□ -2.09
VRK1-202ENST00000553683 ZNF225Q9UK10 706 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 UBQLN1Q9UMX0 589 aaKnown RBP1.98□□□□□ -2.09
VRK1-202ENST00000553683 WSB1Q9Y6I7 421 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 IKBKGQ9Y6K9 419 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 NCAPD2Q15021 1401 aa1.98□□□□□ -2.09
VRK1-202ENST00000553683 ADGRL1O94910 1474 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 IGKV2-28A0A075B6P5 120 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 IGKV2D-24A0A075B6R9 120 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 HELTA6NFD8 242 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 SULT2B1O00204 365 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 DUX1O43812 170 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 IGKV2D-28P01615 120 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 TPM3P06753 285 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 SFTPCP11686 197 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 CD80P33681 288 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 EPHX2P34913 555 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 HSPA1LP34931 641 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 NAPAP54920 295 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 LINC00315P59091 139 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 AP1B1Q10567 949 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 LAGE3Q14657 143 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 ZNF630Q2M218 657 aaPredicted RBP1.97□□□□□ -2.09
VRK1-202ENST00000553683 ZNF691Q5VV52 312 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 RNF165Q6ZSG1 346 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 CENPUQ71F23 418 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 FAM220AQ7Z4H9 259 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 NRMQ8IXM6 262 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 SAXO1Q8IYX7 474 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 SVOPLQ8N434 492 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms