RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 KIAA0513O60268 411 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 STX11O75558 287 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 THBDP07204 575 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 KRT16P08779 473 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 CHI3L1P36222 383 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-206ENST00000553529 MTERF4Q7Z6M4 381 aaKnown RBP16.27■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF527Q8NB42 609 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 OR5W2Q8NH69 310 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 MIPOL1Q8TD10 442 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF75CPQ92670 426 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF775Q96BV0 537 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-206ENST00000553529 AURKBQ96GD4 344 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-206ENST00000553529 OR52E6Q96RD3 313 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 NMUR2Q9GZQ4 415 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 PCDHGB4Q9UN71 923 aa16.27■□□□□ 0.2
SHMT2-206ENST00000553529 HIVEP1P15822 2718 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 SS18L1O75177 396 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-206ENST00000553529 ATE1O95260 518 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 CSTAP01040 98 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 PGRP06401 933 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 CRHP06850 196 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 LOXP28300 417 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-206ENST00000553529 AGTR1P30556 359 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 RYKP34925 604 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 PGM1P36871 562 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 TIGD2Q4W5G0 525 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 GPAT3Q53EU6 434 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 ANXA8L1Q5VT79 327 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 PAMR1Q6UXH9 720 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 SPNS3Q6ZMD2 512 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 ZNF621Q6ZSS3 439 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 ESPNLQ6ZVH7 1005 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 TUSC5Q8IXB3 177 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 CNOT9Q92600 299 aaKnown RBP16.26■□□□□ 0.19
SHMT2-206ENST00000553529 VPS33AQ96AX1 596 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 PIK3IP1Q96FE7 263 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 MAELQ96JY0 434 aaKnown RBP16.26■□□□□ 0.19
SHMT2-206ENST00000553529 DACH2Q96NX9 599 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 PANX1Q96RD7 426 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 EBF4Q9BQW3 602 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 HOXD1Q9GZZ0 328 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 SLC24A3Q9HC58 644 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 NKIRAS1Q9NYS0 192 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 BTNL2Q9UIR0 455 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 ING1Q9UK53 422 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-206ENST00000553529 WDR45Q9Y484 360 aa16.26■□□□□ 0.19
SHMT2-206ENST00000553529 DIAPH2O60879 1101 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 SYNGR4O95473 234 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 PLGP00747 810 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-206ENST00000553529 TUBBP07437 444 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 CD8BP10966 210 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 CCNA2P20248 432 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 KHKP50053 298 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 MVDP53602 400 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 CLNS1AP54105 237 aaKnown RBP16.25■□□□□ 0.19
SHMT2-206ENST00000553529 CARD18P57730 90 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 SESN3P58005 492 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 FGFBP1Q14512 234 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 RPS26P11Q5JNZ5 115 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-206ENST00000553529 SPATA19Q7Z5L4 167 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 ATG4DQ86TL0 474 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-206ENST00000553529 HOMEZQ8IX15 550 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 RNF128Q8TEB7 428 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 ZFP90Q8TF47 636 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 GMPPAQ96IJ6 420 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-206ENST00000553529 ZNF300Q96RE9 604 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-206ENST00000553529 LAT2Q9GZY6 243 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 SLC38A1Q9H2H9 487 aa16.25■□□□□ 0.19
SHMT2-206ENST00000553529 MCTS1Q9ULC4 181 aaKnown RBP16.25■□□□□ 0.19
SHMT2-206ENST00000553529 H3BNH8 94 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 ERLIN1O75477 346 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 ME2P23368 584 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 ALKBH2Q6NS38 261 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 BHLHB9Q6PI77 547 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 STAC2Q6ZMT1 411 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 CROCCP2Q86T23 111 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 ZNF619Q8N2I2 560 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 FAM71CQ8NEG0 241 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 THOC1Q96FV9 657 aaKnown RBP16.24■□□□□ 0.19
SHMT2-206ENST00000553529 MED18Q9BUE0 208 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 OR11A1Q9GZK7 315 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 CTPS2Q9NRF8 586 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 GPC6Q9Y625 555 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-206ENST00000553529 USH1CQ9Y6N9 552 aa16.24■□□□□ 0.19
SHMT2-206ENST00000553529 MED13LQ71F56 2210 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 PRR14LQ5THK1 2151 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 TRPC5OSA6NMA1 111 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 ZNF814B7Z6K7 855 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 SMAD9O15198 467 aaKnown RBP16.23■□□□□ 0.19
SHMT2-206ENST00000553529 RAMP1O60894 148 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 SNUPNO95149 360 aaKnown RBP16.23■□□□□ 0.19
SHMT2-206ENST00000553529 PLAUP00749 431 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 NUDT7P0C024 238 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 FCGR2AP12318 317 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 ETFAP13804 333 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 ELK4P28324 431 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 PEX19P40855 299 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 SLC18A1P54219 525 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 SUMO3P55854 103 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-206ENST00000553529 CTBP2P56545 445 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms