RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 C15orf38-AP3S2A0A0A6YYH1 394 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 TPST2O60704 377 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 PCMT1P22061 227 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 C1orf61Q13536 156 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 ELAVL3Q14576 367 aaKnown RBP3.79□□□□□ -1.8
SYNE2-210ENST00000553455 TP53I3Q53FA7 332 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 METTL11BQ5VVY1 283 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 LIPNQ5VXI9 398 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 OLFML2AQ68BL7 652 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 TMEM225Q6GV28 225 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 CENPPQ6IPU0 288 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 TMEM110Q86TL2 294 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 CATSPER1Q8NEC5 780 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 ZNF606Q8WXB4 792 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 FAF2Q96CS3 445 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 PSKH2Q96QS6 385 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 APMAPQ9HDC9 416 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 ZNF275Q9NSD4 429 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-210ENST00000553455 SMOXQ9NWM0 555 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 VNN3Q9NY84 501 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 IL36GQ9NZH8 169 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 RPH3ALQ9UNE2 315 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 CA5BQ9Y2D0 317 aa3.79□□□□□ -1.8
SYNE2-210ENST00000553455 AK6Q9Y3D8 172 aaKnown RBP3.79□□□□□ -1.8
SYNE2-210ENST00000553455 KLF18A0A0U1RQI7 1052 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 CLRN2A0PK11 232 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 LRP5LA4QPB2 252 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 DHRS7CA6NNS2 312 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 CXCL11O14625 94 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 LRATO95237 230 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 P0C879 139 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 IGLL1P15814 213 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 NMT1P30419 496 aaKnown RBP3.78□□□□□ -1.8
SYNE2-210ENST00000553455 HSPA2P54652 639 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 OC90Q02509 493 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-210ENST00000553455 GANABQ14697 944 aaKnown RBP3.78□□□□□ -1.8
SYNE2-210ENST00000553455 SLC25A52Q3SY17 297 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 OR2B11Q5JQS5 317 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 TPRA1Q86W33 373 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 APOBEC3FQ8IUX4 373 aaKnown RBP3.78□□□□□ -1.8
SYNE2-210ENST00000553455 VSTM4Q8IW00 320 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 CADM2Q8N3J6 435 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 SLC25A38Q96DW6 304 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 CHIAQ9BZP6 476 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 ZNF702PQ9H963 129 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 TNFRSF19Q9NS68 423 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 PDE10AQ9Y233 779 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 MEMO1Q9Y316 297 aa3.78□□□□□ -1.8
SYNE2-210ENST00000553455 AGRNO00468 2067 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 A0A1B0GWB2 263 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 SULT2B1O00204 365 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 WWP2O00308 870 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 RS1O15537 224 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 RIPK2O43353 540 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 PRKYO43930 277 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 IGHV3-23P01764 117 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 IGHG4P01861 327 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 ALOX5P09917 674 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 PNMTP11086 282 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 ZNF44P15621 663 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 VDAC1P21796 283 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 GCKP35557 465 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 KIR2DS2P43631 304 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 CASP4P49662 377 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 PRKXP51817 358 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 MESDQ14696 234 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 PDK3Q15120 406 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 PAGE2BQ5JRK9 111 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 KDELC1Q6UW63 502 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 SYT10Q6XYQ8 523 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 FBXO16Q8IX29 292 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-210ENST00000553455 SKA3Q8IX90 412 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 ZNF679Q8IYX0 411 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 CLEC4FQ8N1N0 589 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 ZCCHC7Q8N3Z6 543 aaKnown RBP3.77□□□□□ -1.81
SYNE2-210ENST00000553455 OR4D9Q8NGE8 314 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 PAQR8Q8TEZ7 354 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 SLC41A3Q96GZ6 507 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 COQ2Q96H96 371 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 ZNF670Q9BS34 389 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 NIPSNAP3BQ9BS92 247 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 RNF126Q9BV68 326 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 SPATA16Q9BXB7 569 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 MAGT1Q9H0U3 335 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 Q9H3A6 140 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 WARS2Q9UGM6 360 aaKnown RBP3.77□□□□□ -1.81
SYNE2-210ENST00000553455 LCMT1Q9UIC8 334 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 KLHL21Q9UJP4 597 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 PTBP2Q9UKA9 531 aaKnown RBP3.77□□□□□ -1.81
SYNE2-210ENST00000553455 ERVW-1Q9UQF0 538 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 VSIG4Q9Y279 399 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 POLDIP2Q9Y2S7 368 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 MMP24Q9Y5R2 645 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 SLCO1B1Q9Y6L6 691 aa3.77□□□□□ -1.81
SYNE2-210ENST00000553455 VSTM2BA6NLU5 285 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 ERI2A8K979 691 aaKnown RBP3.76□□□□□ -1.81
SYNE2-210ENST00000553455 UGT2B17O75795 530 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 GNA14O95837 355 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 CAPN1P07384 714 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 CCDC166P0CW27 439 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms