RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SERPINA9Q86WD7 417 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 DCUN1D3Q8IWE4 304 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 KATNAL2Q8IYT4 538 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 FGFRL1Q8N441 504 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 ZNF491Q8N8L2 437 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 OR2L3Q8NG85 312 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 OR1L6Q8NGR2 347 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 TRUB1Q8WWH5 349 aaKnown RBP4.76□□□□□ -1.65
SCFD1-208ENST00000553278 UBE2E3Q969T4 207 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 ISG20Q96AZ6 181 aaKnown RBP4.76□□□□□ -1.65
SCFD1-208ENST00000553278 ZBTB9Q96C00 473 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 TM4SF19Q96DZ7 209 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 NUS1Q96E22 293 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 SERAC1Q96JX3 654 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 C9orf85Q96MD7 179 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 TECTBQ96PL2 329 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 SLC35A5Q9BS91 424 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 ILKAPQ9H0C8 392 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-208ENST00000553278 GLIPR2Q9H4G4 154 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 ANKRD19PQ9H560 264 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 GEMIN7Q9H840 131 aaKnown RBP4.76□□□□□ -1.65
SCFD1-208ENST00000553278 POPDC2Q9HBU9 364 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 EXOSC3Q9NQT5 275 aaKnown RBP4.76□□□□□ -1.65
SCFD1-208ENST00000553278 BFARQ9NZS9 450 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 GAB2Q9UQC2 676 aa4.76□□□□□ -1.65
SCFD1-208ENST00000553278 CSDC2Q9Y534 153 aaKnown RBP4.76□□□□□ -1.65
SCFD1-208ENST00000553278 PHLPP2Q6ZVD8 1323 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 USP6P35125 1406 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 A0A1W2PPE3 182 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 CCDC182A6NF36 153 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 NTN3O00634 580 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-208ENST00000553278 IGHG4P01861 327 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 PVRP15151 417 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 YWHABP31946 246 aaKnown RBP4.75□□□□□ -1.65
SCFD1-208ENST00000553278 CD80P33681 288 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 ETV1P50549 477 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 CRYBB1P53674 252 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-208ENST00000553278 NDUFV3P56181 108 aaKnown RBP4.75□□□□□ -1.65
SCFD1-208ENST00000553278 ZNF154Q13106 437 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 IL18R1Q13478 541 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 FHL1Q13642 323 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 NECTIN1Q15223 517 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 PPP1R3AQ16821 1122 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 CNPY1Q3B7I2 92 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 MOGAT2Q3SYC2 334 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 TIGITQ495A1 244 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 C1orf220Q5T0J3 134 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 PVRIGQ6DKI7 326 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 ENPP6Q6UWR7 440 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 CCDC65Q8IXS2 484 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 ATP6V0D2Q8N8Y2 350 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 SUMF1Q8NBK3 374 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 SDR9C7Q8NEX9 313 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 PRSS33Q8NF86 280 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 OR2T33Q8NG76 320 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 CRYGNQ8WXF5 182 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 ELMO1Q92556 727 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 CXorf40BQ96DE9 158 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 TGS1Q96RS0 853 aaKnown RBP4.75□□□□□ -1.65
SCFD1-208ENST00000553278 FMO2Q99518 471 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 GLT8D2Q9H1C3 349 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 RHBGQ9H310 441 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 PPDPFQ9H3Y8 114 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 ANKRA2Q9H9E1 313 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 NHEJ1Q9H9Q4 299 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-208ENST00000553278 NMRAL1Q9HBL8 299 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 NUDT15Q9NV35 164 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 EHFQ9NZC4 300 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 SPATA2Q9UM82 520 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 NTNG1Q9Y2I2 539 aa4.75□□□□□ -1.65
SCFD1-208ENST00000553278 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-208ENST00000553278 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-208ENST00000553278 SAGE2PA6NJ88 616 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 FCN1O00602 326 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 H6PDO95479 791 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 IGLV2-11P01706 119 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 IGHV3-9P01782 118 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 S100A9P06702 114 aaKnown RBP4.74□□□□□ -1.65
SCFD1-208ENST00000553278 TPM1P09493 284 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 RNH1P13489 461 aaKnown RBP4.74□□□□□ -1.65
SCFD1-208ENST00000553278 PTBP1P26599 531 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCFD1-208ENST00000553278 HNRNPH3P31942 346 aaKnown RBP4.74□□□□□ -1.65
SCFD1-208ENST00000553278 OTX1P32242 354 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-208ENST00000553278 MAP3K8P41279 467 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 RAB9AP51151 201 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 GSCP56915 257 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-208ENST00000553278 CDK16Q00536 496 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 ST3GAL3Q11203 375 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 DNAJC3Q13217 504 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 MAB21L1Q13394 359 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 FASTKD3Q14CZ7 662 aaKnown RBP4.74□□□□□ -1.65
SCFD1-208ENST00000553278 CHRNA6Q15825 494 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 ALKBH6Q3KRA9 238 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 C14orf28Q4W4Y0 310 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 SBK1Q52WX2 424 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 PIP5KL1Q5T9C9 394 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 RNF130Q86XS8 419 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 OR7G2Q8NG99 324 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 SCARB1Q8WTV0 552 aa4.74□□□□□ -1.65
SCFD1-208ENST00000553278 MRPS31Q92665 395 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms