RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 PRAMEF7Q5VXH5 474 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 PLXDC2Q6UX71 529 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 ZNF836Q6ZNA1 936 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 SEM1Q6ZVN7 128 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 MRGPRGQ86SM5 289 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 PTOV1Q86YD1 416 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 CMIPQ8IY22 773 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 FBXO27Q8NI29 283 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 RP9Q8TA86 221 aaKnown RBP12.74□□□□□ -0.37
PTCH1-226ENST00000553011 BBS10Q8TAM1 723 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 CCT8L2Q96SF2 557 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 TMEM38AQ9H6F2 299 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 KAT8Q9H7Z6 458 aaKnown RBP12.74□□□□□ -0.37
PTCH1-226ENST00000553011 DNAJB12Q9NXW2 375 aaKnown RBP12.74□□□□□ -0.37
PTCH1-226ENST00000553011 ZNF443Q9Y2A4 671 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-226ENST00000553011 ARL2BPQ9Y2Y0 163 aa12.74□□□□□ -0.37
PTCH1-226ENST00000553011 SETXQ7Z333 2677 aaKnown RBP12.74□□□□□ -0.37
PTCH1-226ENST00000553011 LINC01387J3KSC0 135 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 EFNA2O43921 213 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 EPPINO95925 133 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 HOXD4P09016 255 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-226ENST00000553011 PGCP20142 388 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 SLC6A2P23975 617 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 PTGER4P35408 488 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 SMSP52788 366 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 SUCLG1P53597 346 aaKnown RBP12.73□□□□□ -0.37
PTCH1-226ENST00000553011 CDSNQ15517 529 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 BCL2A1Q16548 175 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 LIN52Q52LA3 116 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 REEP3Q6NUK4 255 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 CCDC71Q8IV32 467 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-226ENST00000553011 CLIP4Q8N3C7 705 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 ZNF808Q8N4W9 903 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-226ENST00000553011 METTL25Q8N6Q8 603 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 PCYOX1LQ8NBM8 494 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 OR10A6Q8NH74 314 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 ZPLD1Q8TCW7 415 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 PSMG3-AS1Q96PY0 264 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 TRIB1Q96RU8 372 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 RSPO3Q9BXY4 272 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-226ENST00000553011 PIF1Q9H611 641 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 TMEM185BQ9H7F4 350 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 RLIMQ9NVW2 624 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 CHST2Q9Y4C5 530 aa12.73□□□□□ -0.37
PTCH1-226ENST00000553011 HCFC1P51610 2035 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 CDHR4A6H8M9 788 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 CLCA1A8K7I4 914 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 AP3D1O14617 1153 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 AIM2O14862 343 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 SHOX2O60902 331 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-226ENST00000553011 NTN1O95631 604 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 NPPAP01160 153 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 THBS1P07996 1170 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 PABPC4LP0CB38 370 aaKnown RBP12.72□□□□□ -0.37
PTCH1-226ENST00000553011 AQP1P29972 269 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 EIF1P41567 113 aaKnown RBP12.72□□□□□ -0.37
PTCH1-226ENST00000553011 GZMMP51124 257 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 SESN3P58005 492 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 EEF1A1P68104 462 aaKnown RBP12.72□□□□□ -0.37
PTCH1-226ENST00000553011 LARS2Q15031 903 aaKnown RBP12.72□□□□□ -0.37
PTCH1-226ENST00000553011 ZNF311Q5JNZ3 666 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 NSUN5P2Q63ZY6 315 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 NET1Q7Z628 596 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-226ENST00000553011 GGNQ86UU5 652 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 LSRQ86X29 649 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-226ENST00000553011 ZZZ3Q8IYH5 903 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 MEIOBQ8N635 442 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 C11orf65Q8NCR3 313 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 HIPK4Q8NE63 616 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 OR8J3Q8NGG0 315 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 OR10Q1Q8NGQ4 319 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 RND1Q92730 232 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 SDCCAG3Q96C92 435 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 EXOSC3Q9NQT5 275 aaKnown RBP12.72□□□□□ -0.37
PTCH1-226ENST00000553011 GID8Q9NWU2 228 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 ADAM21Q9UKJ8 722 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 ZNF232Q9UNY5 417 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 USP22Q9UPT9 525 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 RNF6Q9Y252 685 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 ANGPT4Q9Y264 503 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 GPC6Q9Y625 555 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-226ENST00000553011 AP4B1Q9Y6B7 739 aa12.72□□□□□ -0.37
PTCH1-226ENST00000553011 A0A0G2JNJ9 132 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 ETV2O00321 342 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-226ENST00000553011 TOXO94900 526 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 CLDN1O95832 211 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 FAM107AO95990 144 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 GKN3PP0CG01 181 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 ETS2P15036 469 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 ADH6P28332 368 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 SHC1P29353 583 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 RAC1P63000 192 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 RBBP4Q09028 425 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 SF3B4Q15427 424 aaKnown RBP eCLIP12.71□□□□□ -0.37
PTCH1-226ENST00000553011 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 RNF220Q5VTB9 566 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 XKRXQ6PP77 449 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 ADGRE4PQ86SQ3 457 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 SERPINA11Q86U17 422 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms