RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	MED31	Q9Y3C7	131 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	GPR179	Q6PRD1	2367 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	NSG1	A0A0A6YYJ2	146 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	SPAAR	A0A1B0GVQ0	90 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	DPPA5	A6NC42	116 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	C21orf140	B9A014	251 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	NDUFB5	O43674	189 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	MPZL2	O60487	215 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	IGFBP1	P08833	259 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	IFI30	P13284	250 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	CSRP1	P21291	193 aa	Known RBP	11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	GPR4	P46093	362 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	RPL5	P46777	297 aa	Known RBP	11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	IDH2	P48735	452 aa	Known RBP	11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	CDH15	P55291	814 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	CTBP2	P56545	445 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	RPS15	P62841	145 aa	Known RBP	11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	DNASE1L3	Q13609	305 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	SSPN	Q14714	243 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	BROX	Q5VW32	411 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	TMEM236	Q5W0B7	351 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	LYPD8	Q6UX82	237 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	NUP54	Q7Z3B4	507 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	PPP1R32	Q7Z5V6	425 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	MARCH3	Q86UD3	253 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	KIF18B	Q86Y91	864 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	CDK20	Q8IZL9	346 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	CLDN22	Q8N7P3	220 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	PFN4	Q8NHR9	129 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	TEX47	Q8TBZ9	253 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	RNF138	Q8WVD3	245 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	APH1B	Q8WW43	257 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	TTC9	Q92623	222 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	C3orf49	Q96BT1	292 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	DSN1	Q9H410	356 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	SLC25A19	Q9HC21	320 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	RASSF1	Q9NS23	344 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	ZNF226	Q9NYT6	803 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	NIN	Q8N4C6	2090 aa		11.62	□□□□□ -0.55
CACNB3-223	ENST00000552480	UNC119B	A6NIH7	251 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	PROB1	E7EW31	1015 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	SCO2	O43819	266 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	ZNF354A	O60765	605 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	WBP4	O75554	376 aa	Known RBP	11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	OR2J2	O76002	312 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	TNFSF15	O95150	251 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	TFAP2A	P05549	437 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	FBXO45	P0C2W1	286 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	GABRB1	P18505	474 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	EEF1B2	P24534	225 aa	Known RBP	11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	FMO3	P31513	532 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	CCR4	P51679	360 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	GTF2A1	P52655	376 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	NR1H2	P55055	460 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	FBXW4	P57775	412 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	RPS18	P62269	152 aa	Known RBP	11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	CSNK2B	P67870	215 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	CDK5	Q00535	292 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	KIF26B	Q2KJY2	2108 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	ZNF773	Q6PK81	442 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	CBLN3	Q6UW01	205 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	CASP12	Q6UXS9	341 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	ZNF620	Q6ZNG0	422 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	TMPRSS11F	Q6ZWK6	438 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	TMPRSS12	Q86WS5	348 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	MEX3D	Q86XN8	651 aa	Known RBP	11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	P3H2	Q8IVL5	708 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	BPIFB6	Q8NFQ5	453 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	NACC2	Q96BF6	587 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	NODAL	Q96S42	347 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	GPR87	Q9BY21	358 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	RTN4R	Q9BZR6	473 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	C12orf10	Q9HB07	376 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	RYDEN	Q9NUL5	291 aa	Known RBP	11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	SCN3B	Q9NY72	215 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	TPRKB	Q9Y3C4	175 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	CDH10	Q9Y6N8	788 aa		11.61	□□□□□ -0.55
CACNB3-223	ENST00000552480	EXPH5	Q8NEV8	1989 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480		A0A087WUJ7	227 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	KPNA4	O00629	521 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	CDC42EP2	O14613	210 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	ADAM10	O14672	748 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	TERT	O14746	1132 aa	Known RBP	11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	HCRTR2	O43614	444 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	RAD1	O60671	282 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	FAM20B	O75063	409 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	HP	P00738	406 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	CELA2A	P08217	269 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	PNMT	P11086	282 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	PGC	P20142	388 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	MAK	P20794	623 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	PTN	P21246	168 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	OTX2	P32243	289 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	GIPR	P48546	466 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	P2RX1	P51575	399 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	SMS	P52788	366 aa		11.6	□□□□□ -0.55
CACNB3-223	ENST00000552480	SNRPG	P62308	76 aa	Known RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms