RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 RPAP1Q9BWH6 1393 aaPredicted RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 ANKRD30AQ9BXX3 1397 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 LOC105371267A0A1B0GV96 52 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 TMEM213A2RRL7 107 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 SERINC4A6NH21 518 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 SRRM4A7MD48 611 aaKnown RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 E7EWF7 191 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 RHODO00212 210 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 GAPDHSO14556 408 aaPredicted RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 WNT9BO14905 357 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 XRCC2O43543 280 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 PRKAB2O43741 272 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 HUS1O60921 280 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 RNASEH1O60930 286 aaKnown RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 FCN3O75636 299 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 AP2A2O94973 939 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 TMEM50AO95807 157 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 CD3GP09693 182 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 SMIM10L1P0DMW3 83 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 ANXA3P12429 323 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 ZNF43P17038 809 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 WT1P19544 449 aaPredicted RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 PGCP20142 388 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 UGT1A4P22310 534 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 AADACP22760 399 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 TEAD1P28347 426 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 GABRR2P28476 465 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 TNFSF8P32971 234 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 EPHX2P34913 555 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 PCK1P35558 622 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 RPL13AP40429 203 aaKnown RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 SLC26A3P40879 764 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 PTH2RP49190 550 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 TGM4P49221 684 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 SERPINB9P50453 376 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 KCNJ2P63252 427 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 REEP5Q00765 189 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 CDR2Q01850 454 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 OC90Q02509 493 aaPredicted RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 GUCY2DQ02846 1103 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 MFGE8Q08431 387 aaPredicted RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 SELENBP1Q13228 472 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 GRB7Q14451 532 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 SNAI3Q3KNW1 292 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 PHLDA2Q53GA4 152 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 STUMQ69YW2 141 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 SLC27A4Q6P1M0 643 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 RHBDF2Q6PJF5 856 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 NIPA1Q7RTP0 329 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 SLC16A14Q7RTX9 510 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 NET1Q7Z628 596 aaPredicted RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 ANKRD37Q7Z713 158 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 ERICH1Q86X53 443 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 MCOLN2Q8IZK6 566 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 THAP6Q8TBB0 222 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 CA5BP1Q8WTZ4 195 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 PIGTQ969N2 578 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 TIMD4Q96H15 378 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 SMIM10Q96HG1 83 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 RITA1Q96K30 269 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 FAM84BQ96KN1 310 aaPredicted RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 TIMP4Q99727 224 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 HSD17B14Q9BPX1 270 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 PANK2Q9BZ23 570 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 SLC29A3Q9BZD2 475 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 FAM49AQ9H0Q0 323 aaPredicted RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 UPF3AQ9H1J1 476 aaKnown RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 NXF3Q9H4D5 531 aaKnown RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 TLE6Q9H808 572 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 SLC17A5Q9NRA2 495 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 STARD5Q9NSY2 213 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 RNF186Q9NXI6 227 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 IKZF3Q9UKT9 509 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 LAMP3Q9UQV4 416 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 TSSC4Q9Y5U2 329 aaPredicted RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 PRR32B1ATL7 298 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 GOLGA6L19H0YKK7 550 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 M0R3G1 203 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 IMPA2O14732 288 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 SH2D1BO14796 132 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 INSIG1O15503 277 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 B4GALT5O43286 388 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 CYTH3O43739 400 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 RAMP3O60896 148 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 PSIP1O75475 530 aaKnown RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 WISP2O76076 250 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 JTBO76095 146 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 OAZ2O95190 189 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 IFNA6P05013 189 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 IL6P05231 212 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 CHRM5P08912 532 aaPredicted RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 RD3LP0DJH9 198 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 ACP2P11117 423 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 NR2C1P13056 603 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 BCKDHBP21953 392 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 RBMS1P29558 406 aaKnown RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 PRDX3P30048 256 aaKnown RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 CEACAM3P40198 252 aa3.72□□□□□ -1.81
USP44-208ENST00000552440 GTF2A1P52655 376 aaPredicted RBP3.72□□□□□ -1.81
USP44-208ENST00000552440 CDH12P55289 794 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms