RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 PINK1Q9BXM7 581 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 RTN4RQ9BZR6 473 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 RABEP2Q9H5N1 569 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 TIGARQ9NQ88 270 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 POLE3Q9NRF9 147 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 SERINC1Q9NRX5 453 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 PAQR5Q9NXK6 330 aaPredicted RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 CALML5Q9NZT1 146 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 CCDC167Q9P0B6 97 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 P2RX2Q9UBL9 471 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 MCTS1Q9ULC4 181 aaKnown RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 LIPT1Q9Y234 373 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 INTS1Q8N201 2190 aaKnown RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 PTPN13Q12923 2485 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 SPTBN1Q01082 2364 aaKnown RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 USP9XQ93008 2570 aaPredicted RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 MED12Q93074 2177 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 IGLV3-32A0A0A0MS00 114 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 A0A0G2JND7 137 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 MBD3L4A6NDZ8 208 aaPredicted RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 MBD3L3A6NE82 208 aaPredicted RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 MBD3L5A6NJ08 208 aaPredicted RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 EVPLLA8MZ36 301 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 NR5A2O00482 541 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF195O14628 629 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 FCMRO60667 390 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 SCN2BO60939 215 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 UGT2B17O75795 530 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 RGS9O75916 674 aaPredicted RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 TOXO94900 526 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 RCBTB2O95199 551 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 OPN1LWP04000 364 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 VIMP08670 466 aaKnown RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 UBTFL6P0CB48 400 aaPredicted RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 FCGR2AP12318 317 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 UQCRBP14927 111 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 IL7RP16871 459 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 SLC7A1P30825 629 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 SSTR2P30874 369 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 RYKP34925 604 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 SFTPDP35247 375 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 CDKN2CP42773 168 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 KIR2DL3P43628 341 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 KCNJ5P48544 419 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF136P52737 540 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 CTBP2P56545 445 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 CLDN15P56746 228 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 CLDN20P56880 219 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 B3GALT5-AS1P59052 145 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 DSTNP60981 165 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 RAC1P63000 192 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 SIRPAP78324 504 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 SQLEQ14534 574 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 CD226Q15762 336 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 SYPL1Q16563 259 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 PLPPR5Q32ZL2 321 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 KLHL26Q53HC5 615 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 EXOSC6Q5RKV6 272 aaKnown RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 HBMQ6B0K9 141 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 GTF2IRD2BQ6EKJ0 949 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 POMZP3Q6PJE2 187 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 ARSKQ6UWY0 536 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 LRRC74BQ6ZQY2 392 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 ESPNLQ6ZVH7 1005 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 OLIG3Q7RTU3 272 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 MAVSQ7Z434 540 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 LUZP2Q86TE4 346 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 GTF2IRD2Q86UP8 949 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 LIX1LQ8IVB5 337 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 PEX5LQ8IYB4 626 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 GCNT2Q8N0V5 402 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 LILRA2Q8N149 483 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 GTPBP8Q8N3Z3 284 aaPredicted RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 C9orf106Q8NAJ2 232 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 OR9I1Q8NGQ6 314 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 OR5W2Q8NH69 310 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 MBD3L2Q8NHZ7 208 aaPredicted RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 FBXO27Q8NI29 283 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 WDR60Q8WVS4 1066 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 RNASE6Q93091 150 aaKnown RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 VPS33AQ96AX1 596 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 SPDL1Q96EA4 605 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 EBF4Q9BQW3 602 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 SIKE1Q9BRV8 207 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 THUMPD3Q9BV44 507 aaKnown RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 SFXN3Q9BWM7 321 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 RBM24Q9BX46 236 aaKnown RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 NMUR2Q9GZQ4 415 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF350Q9GZX5 532 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 LAT2Q9GZY6 243 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 ENKD1Q9H0I2 346 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 ARMC7Q9H6L4 198 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 TMEM185BQ9H7F4 350 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 MTHFD2LQ9H903 347 aaPredicted RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 TPT1P8Q9HAU6 139 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 NPHS2Q9NP85 383 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 FANCFQ9NPI8 374 aa5.32□□□□□ -1.56
CCDC65-204ENST00000552188 SDR39U1Q9NRG7 319 aaPredicted RBP5.32□□□□□ -1.56
CCDC65-204ENST00000552188 MED17Q9NVC6 651 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms