RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 SEL1L2Q5TEA6 688 aa11.53□□□□□ -0.56
SNRPF-203ENST00000551316 TUBA1AQ71U36 451 aa11.53□□□□□ -0.56
SNRPF-203ENST00000551316 REC114Q7Z4M0 266 aa11.53□□□□□ -0.56
SNRPF-203ENST00000551316 SLC43A2Q8N370 569 aa11.53□□□□□ -0.56
SNRPF-203ENST00000551316 RIBC1Q8N443 379 aaPredicted RBP11.53□□□□□ -0.56
SNRPF-203ENST00000551316 FBXO27Q8NI29 283 aa11.53□□□□□ -0.56
SNRPF-203ENST00000551316 CKAP2Q8WWK9 683 aa11.53□□□□□ -0.56
SNRPF-203ENST00000551316 CAB39LQ9H9S4 337 aa11.53□□□□□ -0.56
SNRPF-203ENST00000551316 XAB2Q9HCS7 855 aaKnown RBP11.53□□□□□ -0.56
SNRPF-203ENST00000551316 ASB6Q9NWX5 421 aa11.53□□□□□ -0.56
SNRPF-203ENST00000551316 C1RLQ9NZP8 487 aa11.53□□□□□ -0.56
SNRPF-203ENST00000551316 AMDHD2Q9Y303 409 aa11.53□□□□□ -0.56
SNRPF-203ENST00000551316 ZNF716A6NP11 495 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 PPIHO43447 177 aaKnown RBP11.52□□□□□ -0.57
SNRPF-203ENST00000551316 OXSR1O95747 527 aaPredicted RBP11.52□□□□□ -0.57
SNRPF-203ENST00000551316 GPANK1O95872 356 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 CELA3BP08861 270 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 CECR9P0C854 216 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 SLC1A3P43003 542 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 ALDH9A1P49189 494 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 NAAAQ02083 359 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 TRADDQ15628 312 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 CPSF6Q16630 551 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNRPF-203ENST00000551316 PRSS53Q2L4Q9 553 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 ERCC6LQ2NKX8 1250 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 ACSM5Q6NUN0 579 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 DRICH1Q6PGQ1 229 aaPredicted RBP11.52□□□□□ -0.57
SNRPF-203ENST00000551316 C4orf22Q6V702 233 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 ZC3HC1Q86WB0 502 aaKnown RBP11.52□□□□□ -0.57
SNRPF-203ENST00000551316 TXLNBQ8N3L3 684 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 DEFB108BQ8NET1 73 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 OR4C3Q8NH37 302 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 APH1AQ96BI3 265 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 TM4SF18Q96CE8 201 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 SLC38A2Q96QD8 506 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 DERL2Q9GZP9 239 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 TIGARQ9NQ88 270 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 KLHL21Q9UJP4 597 aa11.52□□□□□ -0.57
SNRPF-203ENST00000551316 H0YIV9 168 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 K7EPI3 171 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 ZNF195O14628 629 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 PHGDHO43175 533 aaKnown RBP11.51□□□□□ -0.57
SNRPF-203ENST00000551316 SEMA3DO95025 777 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 ACHEP22303 614 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 ELK4P28324 431 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 MAPK12P53778 367 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 HNRNPA0Q13151 305 aaKnown RBP11.51□□□□□ -0.57
SNRPF-203ENST00000551316 TCHHL1Q5QJ38 904 aaPredicted RBP11.51□□□□□ -0.57
SNRPF-203ENST00000551316 CCNYL2Q5T2Q4 361 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 COMMD6Q7Z4G1 85 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 UBTD2Q8WUN7 234 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 PIK3R3Q92569 461 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 KTI12Q96EK9 354 aaPredicted RBP11.51□□□□□ -0.57
SNRPF-203ENST00000551316 DNAJA3Q96EY1 480 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 BEX1Q9HBH7 125 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 SLC7A10Q9NS82 523 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 UTS2RQ9UKP6 389 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 RNF11Q9Y3C5 154 aa11.51□□□□□ -0.57
SNRPF-203ENST00000551316 IGHV3OR16-10A0A075B7F0 116 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 IGKV3D-15A0A087WSY6 115 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 CCDC151A5D8V7 595 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 ALG1L2C9J202 215 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 CCDC188H7C350 402 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 UBXN8O00124 270 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 FRS3O43559 492 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 PIAS1O75925 651 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 SEC14L2O76054 403 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 PSMG1O95456 288 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 NGFP01138 241 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 IGHV2-5P01817 119 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 LTA4HP09960 611 aaKnown RBP11.5□□□□□ -0.57
SNRPF-203ENST00000551316 NPR2P20594 1047 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 RAC3P60763 192 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 MVKQ03426 396 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 GALNT1Q10472 559 aaPredicted RBP11.5□□□□□ -0.57
SNRPF-203ENST00000551316 TBX2Q13207 712 aaPredicted RBP11.5□□□□□ -0.57
SNRPF-203ENST00000551316 DECR1Q16698 335 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 CYP27C1Q4G0S4 372 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 ZNF311Q5JNZ3 666 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 SAXO2Q658L1 398 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 OR7E24Q6IFN5 339 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 TTC27Q6P3X3 843 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 GALNT18Q6P9A2 607 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 C16orf87Q6PH81 154 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 TEX9Q8N6V9 391 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 NAT8LQ8N9F0 302 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 ACTRT2Q8TDY3 377 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 CDK15Q96Q40 435 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 MCMBPQ9BTE3 642 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 KATNB1Q9BVA0 655 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 PFDN4Q9NQP4 134 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 TNFRSF19Q9NS68 423 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 OPTCQ9UBM4 332 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 NUP50Q9UKX7 468 aa11.5□□□□□ -0.57
SNRPF-203ENST00000551316 CLPSL1A2RUU4 121 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 H0YL77 283 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 PLOD3O60568 738 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 ERCC1P07992 297 aaPredicted RBP11.49□□□□□ -0.57
SNRPF-203ENST00000551316 SEC24CP53992 1094 aa11.49□□□□□ -0.57
SNRPF-203ENST00000551316 LCN2P80188 198 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms