RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 TAS2R13Q9NYV9 303 aa3.18□□□□□ -1.9
LIMA1-206ENST00000550611 SELENONQ9NZV5 590 aa3.18□□□□□ -1.9
LIMA1-206ENST00000550611 ARMCX1Q9P291 453 aa3.18□□□□□ -1.9
LIMA1-206ENST00000550611 TRMT6Q9UJA5 497 aaKnown RBP3.18□□□□□ -1.9
LIMA1-206ENST00000550611 ZNF490Q9ULM2 529 aaPredicted RBP3.18□□□□□ -1.9
LIMA1-206ENST00000550611 CAMK2AQ9UQM7 478 aa3.18□□□□□ -1.9
LIMA1-206ENST00000550611 SLC22A14Q9Y267 594 aa3.18□□□□□ -1.9
LIMA1-206ENST00000550611 MRPS33Q9Y291 106 aaKnown RBP3.18□□□□□ -1.9
LIMA1-206ENST00000550611 C15orf41Q9Y2V0 281 aa3.18□□□□□ -1.9
LIMA1-206ENST00000550611 SLC6A5Q9Y345 797 aa3.18□□□□□ -1.9
LIMA1-206ENST00000550611 WIF1Q9Y5W5 379 aa3.18□□□□□ -1.9
LIMA1-206ENST00000550611 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 A0A1W2PNV4 684 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 FRG2CA6NGY1 282 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 OR6C76A6NM76 312 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 WASHC1A8K0Z3 465 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 B9A039 149 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 H0Y3Z8 333 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 HCRTR2O43614 444 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CD5LO43866 347 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 FGF17O60258 216 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 GPRIN2O60269 458 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 TRAPPC6AO75865 159 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 LRATO95237 230 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 GUCA1CO95843 209 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 TGM6O95932 706 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CGAP01215 116 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CRHP06850 196 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CCDC175P0C221 793 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 FAM157CP0CG43 387 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 PEPDP12955 493 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 TNNI3P19429 210 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CD22P20273 847 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 ZNF10P21506 573 aaPredicted RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 SAT1P21673 171 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CHMP24386 653 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 ATP5A1P25705 553 aaKnown RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 GDF1P27539 372 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 GALNSP34059 522 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 THBS4P35443 961 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 GGT5P36269 586 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 UGT2B10P36537 528 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CD79BP40259 229 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 PTGDSP41222 190 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CASP2P42575 452 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 RPL21P46778 160 aaKnown RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 KCNJ1P48048 391 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 PGGT1BP53609 377 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 PLA2G16P53816 162 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 NAP1L1P55209 391 aaKnown RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 BASP1P80723 227 aaKnown RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CDKL1Q00532 357 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 ID2Q02363 134 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 ZNF91Q05481 1191 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 STX4Q12846 297 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 SF3A3Q12874 501 aaKnown RBP eCLIP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 RCN2Q14257 317 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 EBPQ15125 230 aaKnown RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 GUSBP1Q15486 140 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 ZKSCAN8Q15776 578 aaPredicted RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 BCL2A1Q16548 175 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 KCTD19Q17RG1 926 aaPredicted RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 HSP90AA5PQ58FG0 334 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 TIGD3Q6B0B8 471 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 ADNP2Q6IQ32 1131 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 GRHL2Q6ISB3 625 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CCDC144NLQ6NUI1 221 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CASC4Q6P4E1 433 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 PLXDC2Q6UX71 529 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 TMEM64Q6YI46 380 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 COLCA1Q6ZS62 124 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 IL17RELQ6ZVW7 336 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 PLEKHM3Q6ZWE6 761 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 GALNT7Q86SF2 657 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 TMPRSS11BQ86T26 416 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 YRDCQ86U90 279 aaKnown RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CNTN4Q8IWV2 1026 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 OR4N5Q8IXE1 308 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 SYCE1Q8N0S2 351 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 ZNF611Q8N823 705 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 ACOT4Q8N9L9 421 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 BBOF1Q8ND07 529 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 FAM83FQ8NEG4 500 aaPredicted RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 LILRB1Q8NHL6 650 aaPredicted RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 CEP70Q8NHQ1 597 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 GABPB2Q8TAK5 448 aaPredicted RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 SLC22A8Q8TCC7 542 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 ADIPOR1Q96A54 375 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 PPWD1Q96BP3 646 aaKnown RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 INTS12Q96CB8 462 aaKnown RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 PIK3IP1Q96FE7 263 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 ZNF597Q96LX8 424 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 COG8Q96MW5 612 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 RILPQ96NA2 401 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 RUNDC3BQ96NL0 473 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 SERPINB12Q96P63 405 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 FYTTD1Q96QD9 318 aaKnown RBP3.17□□□□□ -1.9
LIMA1-206ENST00000550611 F2RL3Q96RI0 385 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 TBCDQ9BTW9 1192 aa3.17□□□□□ -1.9
LIMA1-206ENST00000550611 REG4Q9BYZ8 158 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms