RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 CNOT4O95628 575 aaKnown RBP9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 NTN1O95631 604 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 CSTAP01040 98 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 OPN1LWP04000 364 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 YES1P07947 543 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 PGCP20142 388 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 AGTR1P30556 359 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 QPRTQ15274 297 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 GPR68Q15743 365 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 CEP85LQ5SZL2 805 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 ANKRD34AQ69YU3 496 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 OR4F3Q6IEY1 312 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 PLEKHM3Q6ZWE6 761 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 FCRLAQ7L513 359 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF550Q7Z398 422 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 TMCO5AQ8N6Q1 288 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 TRIML2Q8N7C3 387 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 WFDC11Q8NEX6 87 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 OR5D16Q8NGK9 328 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 OR4A15Q8NGL6 344 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 OR5AK3PQ8NH89 298 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZFP90Q8TF47 636 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 SLC25A43Q8WUT9 341 aaPredicted RBP9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 HSD17B8Q92506 261 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 PMM1Q92871 262 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 PKNOX2Q96KN3 472 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 SLC35G5Q96KT7 338 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 MARK4Q96L34 752 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 ACTR6Q9GZN1 396 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF350Q9GZX5 532 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 CENPHQ9H3R5 247 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 KCNK9Q9NPC2 374 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 RAB21Q9UL25 225 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 CLEC4AQ9UMR7 237 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 SPIN1Q9Y657 262 aaPredicted RBP9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 KCNE3Q9Y6H6 103 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 ACANP16112 2415 aa9.71□□□□□ -0.86
VTI1BP3-201ENST00000550220 TRPC5OSA6NMA1 111 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 SIAH2O43255 324 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 KLF4O43474 513 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 EFNA2O43921 213 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF500O60304 480 aaPredicted RBP9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 FESP07332 822 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 INHBBP09529 407 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 NID1P14543 1247 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 IL32P24001 234 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 S100A3P33764 101 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 APOBEC1P41238 236 aaKnown RBP9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 CLK1P49759 484 aaKnown RBP9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 CCR4P51679 360 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 CSNK2A1P68400 391 aaPredicted RBP9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 HPCAP84074 193 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 SKP2Q13309 424 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 CASP8Q14790 479 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 TNFAIP8L3Q5GJ75 292 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 PDZK1Q5T2W1 519 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 HEPHL1Q6MZM0 1159 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 OGFOD2Q6N063 350 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 C3orf33Q6P1S2 294 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 SPATA19Q7Z5L4 167 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 RFWD2Q8NHY2 731 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 XAGE5Q8WWM1 108 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 ROBO4Q8WZ75 1007 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 NPAS1Q99742 590 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 BDH2Q9BUT1 245 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 THUMPD3Q9BV44 507 aaKnown RBP9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 SAP130Q9H0E3 1048 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 OR51I1Q9H343 314 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 CXorf56Q9H5V9 222 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 UBTD1Q9HAC8 227 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 MEAF6Q9HAF1 191 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 BCO1Q9HAY6 547 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 BTNL2Q9UIR0 455 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 LIPT1Q9Y234 373 aa9.7□□□□□ -0.86
VTI1BP3-201ENST00000550220 NPIPA5A0A0B4J1W7 369 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF724A8MTY0 619 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 E9PBE3 544 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 NPIPA7E9PJI5 369 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 SLCO1B7G3V0H7 640 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 FCMRO60667 390 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 DIAPH2O60879 1101 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 SCN2BO60939 215 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 UGT2B17O75795 530 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 CYP7B1O75881 506 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 CPSF4O95639 269 aaKnown RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 THBDP07204 575 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 NPIPA8P0DM63 369 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 OR12D1P0DN82 309 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 PAX1P15863 534 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ENPP1P22413 925 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ADSLP30566 484 aaPredicted RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 CHI3L1P36222 383 aaPredicted RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 MAGEA8P43361 318 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 HTR3AP46098 478 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 KHKP50053 298 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 MAP2K6P52564 334 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 SLC18A1P54219 525 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms