RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 IL11P20809 199 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 SUCLG1P53597 346 aaKnown RBP20.34■□□□□ 0.85
BRF1-216ENST00000550208 CLDN15P56746 228 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 EEF1A1P68104 462 aaKnown RBP20.34■□□□□ 0.85
BRF1-216ENST00000550208 RBBP4Q09028 425 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 PMPCAQ10713 525 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 FOXF1Q12946 379 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 LARS2Q15031 903 aaKnown RBP20.34■□□□□ 0.85
BRF1-216ENST00000550208 LIN52Q52LA3 116 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 ZNF311Q5JNZ3 666 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 TMEM211Q6ICI0 200 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 CALHM3Q86XJ0 350 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 EID3Q8N140 333 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 C11orf65Q8NCR3 313 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 HIPK4Q8NE63 616 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 GPATCH1Q9BRR8 931 aaKnown RBP20.34■□□□□ 0.85
BRF1-216ENST00000550208 EXOSC3Q9NQT5 275 aaKnown RBP20.34■□□□□ 0.85
BRF1-216ENST00000550208 USP22Q9UPT9 525 aa20.34■□□□□ 0.85
BRF1-216ENST00000550208 GPC6Q9Y625 555 aaPredicted RBP20.34■□□□□ 0.85
BRF1-216ENST00000550208 CDHR4A6H8M9 788 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 H0YC42 278 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 GCM2O75603 506 aaPredicted RBP20.33■□□□□ 0.85
BRF1-216ENST00000550208 THBS1P07996 1170 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 GLI4P10075 376 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 PGCP20142 388 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 AQP1P29972 269 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 EIF1P41567 113 aaKnown RBP20.33■□□□□ 0.85
BRF1-216ENST00000550208 TPD52P55327 224 aaPredicted RBP20.33■□□□□ 0.85
BRF1-216ENST00000550208 NUP107P57740 925 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 SESN3P58005 492 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 ART3Q13508 389 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 MTFR2Q6P444 385 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 RPTNQ6XPR3 784 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 B3GNT6Q6ZMB0 384 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 UBQLNLQ8IYU4 475 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 CCDC197Q8NCU1 140 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 ZPLD1Q8TCW7 415 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 PHF10Q8WUB8 498 aaKnown RBP20.33■□□□□ 0.85
BRF1-216ENST00000550208 SMPDL3BQ92485 455 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 ZNF583Q96ND8 569 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 TUBA1CQ9BQE3 449 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 TTYH2Q9BSA4 534 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 SPATA9Q9BWV2 254 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 CACYBPQ9HB71 228 aaKnown RBP20.33■□□□□ 0.85
BRF1-216ENST00000550208 ARL8BQ9NVJ2 186 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 CMTM6Q9NX76 183 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 AP4B1Q9Y6B7 739 aa20.33■□□□□ 0.85
BRF1-216ENST00000550208 H0Y3Z8 333 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 AP3D1O14617 1153 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 NTN1O95631 604 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 EPPINO95925 133 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 GKN3PP0CG01 181 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 PTGER4P35408 488 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 CPA2P48052 419 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 NUDT2P50583 147 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 CLDN20P56880 219 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 ACSF3Q4G176 576 aaPredicted RBP20.32■□□□□ 0.84
BRF1-216ENST00000550208 SLC25A53Q5H9E4 307 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 SLC15A3Q8IY34 581 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 ACER3Q9NUN7 267 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 ANGPT4Q9Y264 503 aa20.32■□□□□ 0.84
BRF1-216ENST00000550208 USP9XQ93008 2570 aaPredicted RBP20.31■□□□□ 0.84
BRF1-216ENST00000550208 CCT8L1PA6NM43 557 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 M0QX08 132 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 ETV2O00321 342 aaPredicted RBP20.31■□□□□ 0.84
BRF1-216ENST00000550208 SEC14L5O43304 696 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 TPST1O60507 370 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 ADH6P28332 368 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 SLC6A8P48029 635 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 IDH2P48735 452 aaKnown RBP20.31■□□□□ 0.84
BRF1-216ENST00000550208 VMACQ2NL98 169 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 RNF220Q5VTB9 566 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 C8orf82Q6P1X6 216 aaPredicted RBP20.31■□□□□ 0.84
BRF1-216ENST00000550208 HACD2Q6Y1H2 254 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 SEM1Q6ZVN7 128 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 KRT73Q86Y46 540 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 GRAMD2AQ8IUY3 354 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 FITM2Q8N6M3 262 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 ZNF563Q8TA94 476 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 MRGPRX4Q96LA9 322 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 TRIB1Q96RU8 372 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 ZNF607Q96SK3 696 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 HOPXQ9BPY8 73 aaPredicted RBP20.31■□□□□ 0.84
BRF1-216ENST00000550208 TMEM185BQ9H7F4 350 aa20.31■□□□□ 0.84
BRF1-216ENST00000550208 PCNX1Q96RV3 2341 aa20.3■□□□□ 0.84
BRF1-216ENST00000550208 CFAP73A6NFT4 308 aa20.3■□□□□ 0.84
BRF1-216ENST00000550208 PCGF2P35227 344 aa20.3■□□□□ 0.84
BRF1-216ENST00000550208 ACAA2P42765 397 aaKnown RBP20.3■□□□□ 0.84
BRF1-216ENST00000550208 PCBP3P57721 371 aaKnown RBP20.3■□□□□ 0.84
BRF1-216ENST00000550208 RAC1P63000 192 aa20.3■□□□□ 0.84
BRF1-216ENST00000550208 EPS8Q12929 822 aa20.3■□□□□ 0.84
BRF1-216ENST00000550208 SF3B4Q15427 424 aaKnown RBP eCLIP20.3■□□□□ 0.842e-7■■■■■ 32.9
BRF1-216ENST00000550208 ZSWIM7Q19AV6 140 aa20.3■□□□□ 0.84
BRF1-216ENST00000550208 FAM91A1Q658Y4 838 aa20.3■□□□□ 0.84
BRF1-216ENST00000550208 PLXDC2Q6UX71 529 aa20.3■□□□□ 0.84
BRF1-216ENST00000550208 MRGPRGQ86SM5 289 aa20.3■□□□□ 0.84
BRF1-216ENST00000550208 LILRA2Q8N149 483 aa20.3■□□□□ 0.84
BRF1-216ENST00000550208 MEIOBQ8N635 442 aa20.3■□□□□ 0.84
BRF1-216ENST00000550208 ITLN2Q8WWU7 325 aaPredicted RBP20.3■□□□□ 0.84
BRF1-216ENST00000550208 TMEM234Q8WY98 164 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms