RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 FBXW5Q969U6 566 aa10.86□□□□□ -0.67
DDX54-206ENST00000549271 GMPPAQ96IJ6 420 aaPredicted RBP10.86□□□□□ -0.67
DDX54-206ENST00000549271 ADGRG7Q96K78 797 aa10.86□□□□□ -0.67
DDX54-206ENST00000549271 MS4A4EQ96PG1 132 aa10.86□□□□□ -0.67
DDX54-206ENST00000549271 PAIP2Q9BPZ3 127 aaKnown RBP10.86□□□□□ -0.67
DDX54-206ENST00000549271 TBL1XR1Q9BZK7 514 aa10.86□□□□□ -0.67
DDX54-206ENST00000549271 BHLHE41Q9C0J9 482 aaPredicted RBP10.86□□□□□ -0.67
DDX54-206ENST00000549271 ADAM19Q9H013 955 aa10.86□□□□□ -0.67
DDX54-206ENST00000549271 OR10A4Q9H209 315 aa10.86□□□□□ -0.67
DDX54-206ENST00000549271 BARX1Q9HBU1 254 aaPredicted RBP10.86□□□□□ -0.67
DDX54-206ENST00000549271 GLRX2Q9NS18 164 aa10.86□□□□□ -0.67
DDX54-206ENST00000549271 NOP53Q9NZM5 478 aaKnown RBP10.86□□□□□ -0.67
DDX54-206ENST00000549271 GDF2Q9UK05 429 aaPredicted RBP10.86□□□□□ -0.67
DDX54-206ENST00000549271 EMC9Q9Y3B6 208 aa10.86□□□□□ -0.67
DDX54-206ENST00000549271 CADP27708 2225 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 ANKRD28O15084 1053 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 ADAMDEC1O15204 470 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 SS18L1O75177 396 aaPredicted RBP10.85□□□□□ -0.67
DDX54-206ENST00000549271 SNNO75324 88 aaPredicted RBP10.85□□□□□ -0.67
DDX54-206ENST00000549271 ERLIN1O75477 346 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 KCNH1O95259 989 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 HMGN2P05204 90 aaKnown RBP10.85□□□□□ -0.67
DDX54-206ENST00000549271 LCN1P31025 176 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 RFX3P48380 749 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 CCT3P49368 545 aaKnown RBP10.85□□□□□ -0.67
DDX54-206ENST00000549271 SLC18A1P54219 525 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 PHC1P78364 1004 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 SGCBQ16585 318 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 LSM12Q3MHD2 195 aaKnown RBP10.85□□□□□ -0.67
DDX54-206ENST00000549271 VPS26BQ4G0F5 336 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 FIGNL1Q6PIW4 674 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 STAC2Q6ZMT1 411 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 SZRD1Q7Z422 152 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 WDR75Q8IWA0 830 aaKnown RBP10.85□□□□□ -0.67
DDX54-206ENST00000549271 GTPBP8Q8N3Z3 284 aaPredicted RBP10.85□□□□□ -0.67
DDX54-206ENST00000549271 ACTRT2Q8TDY3 377 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 SMAP2Q8WU79 429 aaPredicted RBP10.85□□□□□ -0.67
DDX54-206ENST00000549271 ZBTB8AQ96BR9 441 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 OTUB1Q96FW1 271 aaPredicted RBP10.85□□□□□ -0.67
DDX54-206ENST00000549271 PRPF18Q99633 342 aaKnown RBP10.85□□□□□ -0.67
DDX54-206ENST00000549271 RHNO1Q9BSD3 238 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 DUSP26Q9BV47 211 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 NUF2Q9BZD4 464 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 MEAF6Q9HAF1 191 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 FANCFQ9NPI8 374 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 ZCCHC3Q9NUD5 404 aaKnown RBP10.85□□□□□ -0.67
DDX54-206ENST00000549271 ATAD3AQ9NVI7 634 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 GPATCH2Q9NW75 528 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 SNX8Q9Y5X2 465 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 KCNE3Q9Y6H6 103 aa10.85□□□□□ -0.67
DDX54-206ENST00000549271 ELOA3DA6NLF2 546 aaPredicted RBP10.84□□□□□ -0.67
DDX54-206ENST00000549271 SDHDO14521 159 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 SCN2BO60939 215 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 OXSR1O95747 527 aaPredicted RBP10.84□□□□□ -0.67
DDX54-206ENST00000549271 ALOX5P09917 674 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 EGR1P18146 543 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 IGFBP5P24593 272 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 PSMA4P25789 261 aaKnown RBP10.84□□□□□ -0.67
DDX54-206ENST00000549271 SLC6A8P48029 635 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 PRIM2P49643 509 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 RAC1P63000 192 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 HBA1P69905 142 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 LASP1Q14847 261 aaKnown RBP10.84□□□□□ -0.67
DDX54-206ENST00000549271 CTU2Q2VPK5 515 aaKnown RBP10.84□□□□□ -0.67
DDX54-206ENST00000549271 PGS1Q32NB8 556 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 ELOA3BQ3SY89 546 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 LIPNQ5VXI9 398 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 OR4F3Q6IEY1 312 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 CDC73Q6P1J9 531 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 DNAJC14Q6Y2X3 702 aaPredicted RBP10.84□□□□□ -0.67
DDX54-206ENST00000549271 WFDC8Q8IUA0 241 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 ELOA3Q8NG57 546 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 MGARPQ8TDB4 240 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 ARL8AQ96BM9 186 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 HS6ST2Q96MM7 605 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 STACQ99469 402 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 BTBD2Q9BX70 525 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 PIGUQ9H490 435 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 DUSP22Q9NRW4 184 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 THAP1Q9NVV9 213 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 GIN1Q9NXP7 522 aa10.84□□□□□ -0.67
DDX54-206ENST00000549271 MCTS1Q9ULC4 181 aaKnown RBP10.84□□□□□ -0.67
DDX54-206ENST00000549271 FAM234BA2RU67 622 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 EIF1AYO14602 144 aaKnown RBP10.83□□□□□ -0.68
DDX54-206ENST00000549271 NDUFB5O43674 189 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 SSX4O60224 188 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 LMX1BO60663 402 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 CD8AP01732 235 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 ZNF16P17020 682 aaPredicted RBP10.83□□□□□ -0.68
DDX54-206ENST00000549271 LBPP18428 481 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 PSMB1P20618 241 aaKnown RBP10.83□□□□□ -0.68
DDX54-206ENST00000549271 EIF1AXP47813 144 aaKnown RBP10.83□□□□□ -0.68
DDX54-206ENST00000549271 CTBP2P56545 445 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 POU6F2P78424 691 aaPredicted RBP10.83□□□□□ -0.68
DDX54-206ENST00000549271 CASP8Q14790 479 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 EXOC3L2Q2M3D2 409 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 PGGHGQ32M88 737 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 CCNJQ5T5M9 372 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 CYB5R2Q6BCY4 276 aa10.83□□□□□ -0.68
DDX54-206ENST00000549271 BEND4Q6ZU67 534 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms