RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 CRYGSP22914 178 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 SHC1P29353 583 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 CCKARP32238 428 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 RNF144AP50876 292 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 MAGOHP61326 146 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 UFM1P61960 85 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 KEAP1Q14145 624 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 RNPS1Q15287 305 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 POU4F3Q15319 338 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 ZNF239Q16600 458 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 NDUFAF6Q330K2 333 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 TMEM176BQ3YBM2 270 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 BEND6Q5SZJ8 279 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 EIF3MQ7L2H7 374 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 ARL8AQ96BM9 186 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 TLCD1Q96CP7 247 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 TEX37Q96LM6 180 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 GP6Q9HCN6 339 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 NKIRAS1Q9NYS0 192 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 MARCOQ9UEW3 520 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 CLEC4AQ9UMR7 237 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 WDR45Q9Y484 360 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 GPR45Q9Y5Y3 372 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 A0A1W2PPR1 153 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 KIAA0513O60268 411 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 ATE1O95260 518 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 CSTAP01040 98 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 PPP3CBP16298 524 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 EPHA3P29320 983 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 CHI3L1P36222 383 aaPredicted RBP16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 KHKP50053 298 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 TXNL4AP83876 142 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 SELENBP1Q13228 472 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 SKP2Q13309 424 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 QPRTQ15274 297 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 BEND4Q6ZU67 534 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 STK32CQ86UX6 486 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 HEATR5AQ86XA9 2040 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 TMCO5AQ8N6Q1 288 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 TRIML2Q8N7C3 387 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 GLB1L3Q8NCI6 653 aaPredicted RBP16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 RFWD2Q8NHY2 731 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 MGARPQ8TDB4 240 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 RNF128Q8TEB7 428 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 ST8SIA1Q92185 356 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 RAB8BQ92930 207 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 ZNF524Q96C55 264 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 ROPN1LQ96C74 230 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 SLC35A5Q9BS91 424 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 WDR55Q9H6Y2 383 aaPredicted RBP16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 MANSC1Q9H8J5 431 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 TMBIM4Q9HC24 238 aa16.66■□□□□ 0.26
CHMP1A-203ENST00000547614 CCDC154A6NI56 674 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 DEFB108AA8MXU0 73 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 PGRP06401 933 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 AGTR1P30556 359 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 CCR4P51679 360 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 CASP9P55211 416 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 RAC3P60763 192 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 DEFB113Q30KQ7 82 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 TYW3Q6IPR3 259 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 TNFAIP8L2Q6P589 184 aaPredicted RBP16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 TGIF2LYQ8IUE0 185 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 SLC43A2Q8N370 569 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 ZFP90Q8TF47 636 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 TMEM234Q8WY98 164 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 ROBO4Q8WZ75 1007 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 MAELQ96JY0 434 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 OR52E6Q96RD3 313 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 PANX1Q96RD7 426 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 ZBTB18Q99592 522 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 THUMPD3Q9BV44 507 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 TMUB1Q9BVT8 246 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 KLHL4Q9C0H6 718 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 SLC35A3Q9Y2D2 325 aa16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 MAP1AP78559 2803 aaPredicted RBP16.65■□□□□ 0.26
CHMP1A-203ENST00000547614 MTORP42345 2549 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 GOLGA8QA0A0J9YX86 632 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 CENPVL1A0A0U1RR11 272 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 GOLGA8OA6NCC3 632 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 GOLGA8NF8WBI6 632 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 SIAH2O43255 324 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 PRKD3O94806 890 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 IDO1P14902 403 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 PGCP20142 388 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 IL12AP29459 219 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 SLC7A1P30825 629 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 PGM1P36871 562 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 ANXA11P50995 505 aaKnown RBP16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 NME5P56597 212 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 RIPPLY3P57055 190 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 FUT5Q11128 374 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 MAPK14Q16539 360 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 EXOC3L2Q2M3D2 409 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 TIGD2Q4W5G0 525 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 C3orf33Q6P1S2 294 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 STAC2Q6ZMT1 411 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 FRRS1Q6ZNA5 592 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 OLIG3Q7RTU3 272 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 ZNF619Q8N2I2 560 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms