RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 LNX2Q8N448 690 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 OR5H6Q8NGV6 325 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 OR5J2Q8NH18 312 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 TRMT10AQ8TBZ6 339 aaKnown RBP14.64□□□□□ -0.07
LDLR-204ENST00000545707 TRIM63Q969Q1 353 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 PEX11GQ96HA9 241 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 KXD1Q9BQD3 176 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 SRMSQ9H3Y6 488 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 DAPP1Q9UN19 280 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 COLEC10Q9Y6Z7 277 aa14.64□□□□□ -0.07
LDLR-204ENST00000545707 CDHR4A6H8M9 788 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 GNB5O14775 395 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 ARHGEF9O43307 516 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 PPP1R3DO95685 299 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 SYPP08247 313 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 GAAP10253 952 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 POLR2CP19387 275 aaPredicted RBP14.63□□□□□ -0.07
LDLR-204ENST00000545707 NT5EP21589 574 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 PTBP1P26599 531 aaKnown RBP eCLIP14.63□□□□□ -0.072e-11■□□□□ 9.4
LDLR-204ENST00000545707 PYCR1P32322 319 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 GNG2P59768 71 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 TNK1Q13470 666 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 TIGD3Q6B0B8 471 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 ENPP7Q6UWV6 458 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 LRRC28Q86X40 367 aaPredicted RBP14.63□□□□□ -0.07
LDLR-204ENST00000545707 TIGD4Q8IY51 512 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 COX18Q8N8Q8 333 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 OR4D9Q8NGE8 314 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 GRPEL2Q8TAA5 225 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 ACOT12Q8WYK0 555 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 HSD17B8Q92506 261 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 AKAP1Q92667 903 aaKnown RBP eCLIP14.63□□□□□ -0.072e-6■■■■■ 29.8
LDLR-204ENST00000545707 PHF21AQ96BD5 680 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 PTCHD1Q96NR3 888 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 OR2A5Q96R48 311 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 NDC1Q9BTX1 674 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 JAM3Q9BX67 310 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 GON7Q9BXV9 100 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 ZNF350Q9GZX5 532 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 NTMQ9P121 344 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 A0A0G2JK05 382 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 PRSS38A1L453 326 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 FGF17O60258 216 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 STX11O75558 287 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 ADH1BP00325 375 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 MT-ND5P03915 603 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 CD3GP09693 182 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 PVRP15151 417 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 BTCP35070 178 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 PITPNBP48739 271 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 RPS15AP62244 130 aaKnown RBP14.63□□□□□ -0.07
LDLR-204ENST00000545707 ZNF85Q03923 595 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 MRPL28Q13084 256 aaKnown RBP14.63□□□□□ -0.07
LDLR-204ENST00000545707 MAB21L1Q13394 359 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 PLA1AQ53H76 456 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 OAFQ86UD1 273 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 LIX1LQ8IVB5 337 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 ZNF619Q8N2I2 560 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 OR7G1Q8NGA0 311 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 OR1E3Q8WZA6 343 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 AHCYL2Q96HN2 611 aaKnown RBP14.63□□□□□ -0.07
LDLR-204ENST00000545707 TNFRSF13CQ96RJ3 184 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 PIGUQ9H490 435 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 KIR3DX1Q9H7L2 352 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 IL21RQ9HBE5 538 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 KRCC1Q9NPI7 259 aaPredicted RBP14.63□□□□□ -0.07
LDLR-204ENST00000545707 CMC2Q9NRP2 79 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 NUDT15Q9NV35 164 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 OR6C2Q9NZP2 312 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 SIGLEC7Q9Y286 467 aa14.63□□□□□ -0.07
LDLR-204ENST00000545707 F5P12259 2224 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 FAM86C2PA6NEL3 165 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 FABP7O15540 132 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 ADAM11O75078 769 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 SBK2P0C263 348 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 CT62P0C5K7 136 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 NID1P14543 1247 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 ATP12AP54707 1039 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 SRSF5Q13243 272 aaKnown RBP14.62□□□□□ -0.07
LDLR-204ENST00000545707 ACSM3Q53FZ2 586 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 SMPDL3BQ92485 455 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 CNOT9Q92600 299 aaKnown RBP14.62□□□□□ -0.07
LDLR-204ENST00000545707 GHSRQ92847 366 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 CREB3L1Q96BA8 519 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 ZFP3Q96NJ6 502 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 RPP25Q9BUL9 199 aaKnown RBP14.62□□□□□ -0.07
LDLR-204ENST00000545707 NIPAL2Q9H841 368 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 ADGRL4Q9HBW9 690 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 CD93Q9NPY3 652 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 KLF15Q9UIH9 416 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 MYO15AQ9UKN7 3530 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 KNL1Q8NG31 2342 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 B3GALT2O43825 422 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 FZD7O75084 574 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 SNRPBP14678 240 aaKnown RBP14.62□□□□□ -0.07
LDLR-204ENST00000545707 AHCYP23526 432 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 GABRA3P34903 492 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 BDH1Q02338 343 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 SUZ12Q15022 739 aaKnown RBP14.62□□□□□ -0.07
LDLR-204ENST00000545707 NTRK2Q16620 822 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms