RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 A0A1W2PNV4 684 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 TNFSF11O14788 317 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 SFTPDP35247 375 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 KIR2DL3P43628 341 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 DLX5P56178 289 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 DSTNP60981 165 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 TLE4Q04727 773 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 TOMM34Q15785 309 aaPredicted RBP14.13□□□□□ -0.15
CCDC78-216ENST00000544996 AGKQ53H12 422 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 FUNDC1Q8IVP5 155 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 CMIPQ8IY22 773 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 OR2V1Q8NHB1 315 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 ST8SIA1Q92185 356 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 ZG16BQ96DA0 208 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 AURKBQ96GD4 344 aaPredicted RBP14.13□□□□□ -0.15
CCDC78-216ENST00000544996 KLHL15Q96M94 604 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 QRSL1Q9H0R6 528 aaKnown RBP14.13□□□□□ -0.15
CCDC78-216ENST00000544996 SLC38A1Q9H2H9 487 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 RNF122Q9H9V4 155 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 SERINC1Q9NRX5 453 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 JKAMPQ9P055 326 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 PCDHB14Q9Y5E9 798 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 NBPF19A0A087WUL8 3843 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 CRYBG3Q68DQ2 2970 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 CACNA1CQ13936 2221 aa14.13□□□□□ -0.15
CCDC78-216ENST00000544996 MAST4O15021 2626 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 CENPEQ02224 2701 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 A0A096LPI6 279 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 A0A0G2JND7 137 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 A0A0J9YW62 118 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 AGAP5A6NIR3 686 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 CLIC1O00299 241 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 DNAJA2O60884 412 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 TNFSF13O75888 250 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 NTN1O95631 604 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 PLGP00747 810 aaPredicted RBP14.12□□□□□ -0.15
CCDC78-216ENST00000544996 DBIP07108 87 aaKnown RBP14.12□□□□□ -0.15
CCDC78-216ENST00000544996 CHRM4P08173 479 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 ETFAP13804 333 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 IL7RP16871 459 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 PGM1P36871 562 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 MVDP53602 400 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 CRISP3P54108 245 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 CARD18P57730 90 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 SELENBP1Q13228 472 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 CTU2Q2VPK5 515 aaKnown RBP14.12□□□□□ -0.15
CCDC78-216ENST00000544996 GTDC1Q4AE62 458 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 SLC25A53Q5H9E4 307 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 LUZP2Q86TE4 346 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 PEX5LQ8IYB4 626 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 FAM71CQ8NEG0 241 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 ATP6V1C2Q8NEY4 427 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 OSTF1Q92882 214 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 REXO5Q96IC2 774 aaKnown RBP14.12□□□□□ -0.15
CCDC78-216ENST00000544996 ADGRG7Q96K78 797 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 RBM24Q9BX46 236 aaKnown RBP14.12□□□□□ -0.15
CCDC78-216ENST00000544996 PAIP1Q9H074 479 aaKnown RBP14.12□□□□□ -0.15
CCDC78-216ENST00000544996 CACYBPQ9HB71 228 aaKnown RBP14.12□□□□□ -0.15
CCDC78-216ENST00000544996 MCCC2Q9HCC0 563 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 MED4Q9NPJ6 270 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 EXOSC3Q9NQT5 275 aaKnown RBP14.12□□□□□ -0.15
CCDC78-216ENST00000544996 MED12Q93074 2177 aa14.12□□□□□ -0.15
CCDC78-216ENST00000544996 ARHGAP21Q5T5U3 1957 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 UQCRHLA0A096LP55 91 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 MSTNO14793 375 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 CXCL13O43927 109 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 SMNDC1O75940 238 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCDC78-216ENST00000544996 AQP8O94778 261 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 PABPC4LP0CB38 370 aaKnown RBP14.11□□□□□ -0.15
CCDC78-216ENST00000544996 TROVE2P10155 538 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCDC78-216ENST00000544996 UQCRBP14927 111 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 IL11P20809 199 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 PPIBP23284 216 aaKnown RBP14.11□□□□□ -0.15
CCDC78-216ENST00000544996 SLC7A1P30825 629 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 RYKP34925 604 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 SLC6A8P48029 635 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 SESN3P58005 492 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 FADDQ13158 208 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 TMEM176BQ3YBM2 270 aaPredicted RBP14.11□□□□□ -0.15
CCDC78-216ENST00000544996 METTL21CQ5VZV1 264 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 GTF2IRD2BQ6EKJ0 949 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 HMGN2P46Q86SG4 172 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 GTF2IRD2Q86UP8 949 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 ZNF563Q8TA94 476 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 SLC38A5Q8WUX1 472 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 WDR60Q8WVS4 1066 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 CPNE4Q96A23 557 aaPredicted RBP14.11□□□□□ -0.15
CCDC78-216ENST00000544996 STARD4Q96DR4 205 aa14.11□□□□□ -0.15
CCDC78-216ENST00000544996 NOTCH2Q04721 2471 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 NAV2Q8IVL1 2488 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 A0A1W2PP18 115 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 TUBAL3A6NHL2 446 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 A8MXE2 369 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 ETV2O00321 342 aaPredicted RBP14.1□□□□□ -0.15
CCDC78-216ENST00000544996 EFNA2O43921 213 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 BCHEP06276 602 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 TFPTP0C1Z6 253 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 NID1P14543 1247 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 CAPN3P20807 821 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 KIR2DL2P43627 348 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms