RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 SERPINA11Q86U17 422 aa17.25■□□□□ 0.35
DDX55-211ENST00000544429 GGNQ86UU5 652 aa17.25■□□□□ 0.35
DDX55-211ENST00000544429 ZNF808Q8N4W9 903 aaPredicted RBP17.25■□□□□ 0.35
DDX55-211ENST00000544429 ANKS4BQ8N8V4 417 aa17.25■□□□□ 0.35
DDX55-211ENST00000544429 PCYOX1LQ8NBM8 494 aa17.25■□□□□ 0.35
DDX55-211ENST00000544429 OR52P1PQ8NH57 321 aa17.25■□□□□ 0.35
DDX55-211ENST00000544429 BBS10Q8TAM1 723 aa17.25■□□□□ 0.35
DDX55-211ENST00000544429 MRGPRX4Q96LA9 322 aa17.25■□□□□ 0.35
DDX55-211ENST00000544429 RNF145Q96MT1 663 aa17.25■□□□□ 0.35
DDX55-211ENST00000544429 TUBA1CQ9BQE3 449 aa17.25■□□□□ 0.35
DDX55-211ENST00000544429 THUMPD3Q9BV44 507 aaKnown RBP17.25■□□□□ 0.35
DDX55-211ENST00000544429 CALHM2Q9HA72 323 aa17.25■□□□□ 0.35
DDX55-211ENST00000544429 CAMK2AQ9UQM7 478 aa17.25■□□□□ 0.35
DDX55-211ENST00000544429 UTP20O75691 2785 aaKnown RBP17.24■□□□□ 0.35
DDX55-211ENST00000544429 FAAHO00519 579 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 TOXO94900 526 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 IL7RP16871 459 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 ELK4P28324 431 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 SUCLG1P53597 346 aaKnown RBP17.24■□□□□ 0.35
DDX55-211ENST00000544429 CLDN20P56880 219 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 PCBP3P57721 371 aaKnown RBP17.24■□□□□ 0.35
DDX55-211ENST00000544429 RBBP4Q09028 425 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 PMPCAQ10713 525 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 FOXF1Q12946 379 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 QPRTQ15274 297 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 SF3B4Q15427 424 aaKnown RBP eCLIP17.24■□□□□ 0.351e-13■■■■■ 92.4
DDX55-211ENST00000544429 CDSNQ15517 529 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 CTU2Q2VPK5 515 aaKnown RBP17.24■□□□□ 0.35
DDX55-211ENST00000544429 MMEL1Q495T6 779 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 C8orf82Q6P1X6 216 aaPredicted RBP17.24■□□□□ 0.35
DDX55-211ENST00000544429 XKRXQ6PP77 449 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 ZNF836Q6ZNA1 936 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 MRGPRGQ86SM5 289 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 CALHM3Q86XJ0 350 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 VRK2Q86Y07 508 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 LACC1Q8IV20 430 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 POU5F2Q8N7G0 328 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 NFKBIDQ8NI38 313 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 ST8SIA1Q92185 356 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 RCN3Q96D15 328 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 ADGRG7Q96K78 797 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 CCT8L2Q96SF2 557 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 GPATCH1Q9BRR8 931 aaKnown RBP17.24■□□□□ 0.35
DDX55-211ENST00000544429 CLCF1Q9UBD9 225 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 ADAM21Q9UKJ8 722 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 PRDM4Q9UKN5 801 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 ZNF443Q9Y2A4 671 aaPredicted RBP17.24■□□□□ 0.35
DDX55-211ENST00000544429 ARL2BPQ9Y2Y0 163 aa17.24■□□□□ 0.35
DDX55-211ENST00000544429 INTS1Q8N201 2190 aaKnown RBP17.23■□□□□ 0.35
DDX55-211ENST00000544429 MBD3L4A6NDZ8 208 aaPredicted RBP17.23■□□□□ 0.35
DDX55-211ENST00000544429 MBD3L3A6NE82 208 aaPredicted RBP17.23■□□□□ 0.35
DDX55-211ENST00000544429 MBD3L5A6NJ08 208 aaPredicted RBP17.23■□□□□ 0.35
DDX55-211ENST00000544429 FAM47E-STBD1D6RA91 191 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 H0YC42 278 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 H3BML4 177 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 GCM2O75603 506 aaPredicted RBP17.23■□□□□ 0.35
DDX55-211ENST00000544429 PABPC4LP0CB38 370 aaKnown RBP17.23■□□□□ 0.35
DDX55-211ENST00000544429 POU3F2P20265 443 aaPredicted RBP17.23■□□□□ 0.35
DDX55-211ENST00000544429 IL11P20809 199 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 SLC6A2P23975 617 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 CEACAM8P31997 349 aaPredicted RBP17.23■□□□□ 0.35
DDX55-211ENST00000544429 TIMP3P35625 211 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 SMSP52788 366 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 TPD52P55327 224 aaPredicted RBP17.23■□□□□ 0.35
DDX55-211ENST00000544429 RAC1P63000 192 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 SCARB2Q14108 478 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 ZSWIM7Q19AV6 140 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 LIN52Q52LA3 116 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 RABL3Q5HYI8 236 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 RIPPLY2Q5TAB7 128 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 ZZZ3Q8IYH5 903 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 TMCO5AQ8N6Q1 288 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 MBD3L2Q8NHZ7 208 aaPredicted RBP17.23■□□□□ 0.35
DDX55-211ENST00000544429 RND1Q92730 232 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 SH3GL1Q99961 368 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 SPATA9Q9BWV2 254 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 RLIMQ9NVW2 624 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 ALKBH4Q9NXW9 302 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 IFT52Q9Y366 437 aa17.23■□□□□ 0.35
DDX55-211ENST00000544429 ADGRG4Q8IZF6 3080 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 A0A0G2JNJ9 132 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 H0Y3Z8 333 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 ADAMDEC1O15204 470 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 CLDN1O95832 211 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 NUDT14O95848 222 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 FAM107AO95990 144 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 PGCP20142 388 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 PRDX6P30041 224 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 ACAA2P42765 397 aaKnown RBP17.22■□□□□ 0.35
DDX55-211ENST00000544429 SLC6A8P48029 635 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 SESN3P58005 492 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 FAM91A1Q658Y4 838 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 CLIP4Q8N3C7 705 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 C11orf65Q8NCR3 313 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 HIPK4Q8NE63 616 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 OR10A6Q8NH74 314 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 FBXO27Q8NI29 283 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 SLC35B4Q969S0 331 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 ACER3Q9NUN7 267 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 GID8Q9NWU2 228 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms