RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 DCSTAMPQ9H295 470 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 RAB9BQ9NP90 201 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 ENY2Q9NPA8 101 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 ACSS1Q9NUB1 689 aaPredicted RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC7A7Q9UM01 511 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 MMACHCQ9Y4U1 282 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 FAM221AA4D161 298 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 ACOD1A6NK06 481 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 CDKN2CP42773 168 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 BDH1Q02338 343 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 GPR19Q15760 415 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 NKAIN1Q4KMZ8 207 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 HSD17B12Q53GQ0 312 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 HES5Q5TA89 166 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF782Q6ZMW2 699 aaPredicted RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 Q6ZS52 159 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 Q7L0L9 218 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 SHFQ7M4L6 423 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 METTL4Q8N3J2 472 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 WDR20Q8TBZ3 569 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 KHSRPQ92945 711 aaKnown RBP eCLIP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 FEVQ99581 238 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 CDX2Q99626 313 aaPredicted RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 NTN4Q9HB63 628 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 DYNLRB1Q9NP97 96 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 ERVK-18Q9QC07 812 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 MRPS2Q9Y399 296 aaKnown RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 H0YIV9 168 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 FRS3O43559 492 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CDRT1O95170 752 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 OPN1LWP04000 364 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 TPOP07202 933 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 BMP1P13497 986 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 GGT1P19440 569 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 SOX18P35713 384 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 DCTP40126 519 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 VEZF1Q14119 521 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PYCR3Q53H96 274 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 METRNLQ641Q3 311 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 XKR5Q6UX68 686 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 VASH1Q7L8A9 365 aaPredicted RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 MRPL21Q7Z2W9 205 aaKnown RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 LHFPL3Q86UP9 236 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 SNX29P2Q8IUI4 249 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CCDC71Q8IV32 467 aaPredicted RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 SLITRK4Q8IW52 837 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CCDC28AQ8IWP9 274 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 LKAAEAR1Q8TD35 194 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CA5BP1Q8WTZ4 195 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 FBXL20Q96IG2 436 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PLEK2Q9NYT0 353 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 STOML2Q9UJZ1 356 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 RPH3ALQ9UNE2 315 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PLEKHM1Q9Y4G2 1056 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 LRRC42Q9Y546 428 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 MYH7BA7E2Y1 1941 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 TRBV2A0A0J9YWF9 115 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CENPBD1B2RD01 187 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CTDSP2O14595 271 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 YY2O15391 372 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 MBTPS2O43462 519 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 MRPL33O75394 65 aaKnown RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 IL1AP01583 271 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 GKN3PP0CG01 181 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 GLO1Q04760 184 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CCNJQ5T5M9 372 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CWF19L1Q69YN2 538 aaKnown RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 WDR53Q7Z5U6 358 aaPredicted RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 TOMM5Q8N4H5 51 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 TMEM239Q8WW34 195 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 ST8SIA4Q92187 359 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 WBP2Q969T9 261 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PRRX2Q99811 253 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 DPH1Q9BZG8 443 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 HIF3AQ9Y2N7 669 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 AKAP11Q9UKA4 1901 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 LRP5O75197 1615 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CD3GP09693 182 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC2A2P11168 524 aaPredicted RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 HSD17B1P14061 328 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CYB561P49447 251 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 DPTQ07507 201 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CEACAM7Q14002 265 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 TRAM1Q15629 374 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 ATAD3CQ5T2N8 411 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CLEC2AQ6UVW9 174 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PAQR7Q86WK9 346 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 UCN3Q969E3 161 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 RHOVQ96L33 236 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 IP6K3Q96PC2 410 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CHRDQ9H2X0 955 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 AGPAT4Q9NRZ5 378 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 IL20RAQ9UHF4 553 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 EMC9Q9Y3B6 208 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 TRAV6A0A075B6T7 132 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 K7ESM1 405 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 ALOX12BO75342 701 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms