RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	ZNF385B	Q569K4	471 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	GDPGP1	Q6ZNW5	385 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	C7orf57	Q8NEG2	295 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	RNF138	Q8WVD3	245 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	OTUB1	Q96FW1	271 aa	Predicted RBP	6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	SPATA9	Q9BWV2	254 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	NLN	Q9BYT8	704 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	BHLHE41	Q9C0J9	482 aa	Predicted RBP	6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	SRR	Q9GZT4	340 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	RACGAP1	Q9H0H5	632 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	POLR2J3	Q9H1A7	115 aa	Known RBP	6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	REEP4	Q9H6H4	257 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	ATP13A2	Q9NQ11	1180 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	ACOXL	Q9NUZ1	547 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TRPC4	Q9UBN4	977 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	CLEC2D	Q9UHP7	191 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TNRC6A	Q8NDV7	1962 aa	Known RBP	6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	LOC102723996	A0A087X1L8	192 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341		A0A0G2JN53	185 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	SH3D21	A4FU49	640 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TGFBR3L	H3BV60	316 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	RTCA	O00442	366 aa	Known RBP	6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	RNASET2	O00584	256 aa	Known RBP	6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	LYRM1	O43325	122 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TIAF1	O95411	115 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	PDGFA	P04085	211 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	ATP1B1	P05026	303 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	BCHE	P06276	602 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	CBL	P22681	906 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	CPN2	P22792	545 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	RFX2	P48378	723 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	MVD	P53602	400 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	CAV3	P56539	151 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	PSPH	P78330	225 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	HOXC5	Q00444	222 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TNFRSF17	Q02223	184 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	HSPB3	Q12988	150 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	FGFBP1	Q14512	234 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	DCST1	Q5T197	706 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	FAM92B	Q6ZTR7	304 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	DTX1	Q86Y01	620 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	GRAMD2A	Q8IUY3	354 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	MMP21	Q8N119	569 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	DTX3	Q8N9I9	347 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	SRFBP1	Q8NEF9	429 aa	Known RBP	6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	GEMIN6	Q8WXD5	167 aa	Known RBP	6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	AKAP1	Q92667	903 aa	Known RBP eCLIP	6.81	□□□□□ -1.32	2e-16	■■□□□ 14.2
GTF2H3-212	ENST00000543341	ANKRD9	Q96BM1	317 aa	Predicted RBP	6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TGM7	Q96PF1	710 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TSSK6	Q9BXA6	273 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	SERHL2	Q9H4I8	314 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	ASCL3	Q9NQ33	180 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	GLTP	Q9NZD2	209 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	C5AR2	Q9P296	337 aa		6.81	□□□□□ -1.32
GTF2H3-212	ENST00000543341	PTPRZ1	P23471	2315 aa	Predicted RBP	6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	KIAA1549	Q9HCM3	1950 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TRBV23OR9-2	A0A075B6M9	112 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TRAV6	A0A075B6T7	132 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	PRR23D1	E9PI22	279 aa	Predicted RBP	6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	ZNF749	O43361	778 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	OR1F1	O43749	312 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	DNAJB6	O75190	326 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	IL3	P08700	152 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	ZNF888	P0CJ79	500 aa	Predicted RBP	6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	PRR23D2	P0DMB1	279 aa	Predicted RBP	6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TYRP1	P17643	537 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	KIR2DL3	P43628	341 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	XK	P51811	444 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	RAB38	P57729	211 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	ACY1	Q03154	408 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TARDBP	Q13148	414 aa	Known RBP eCLIP	6.8	□□□□□ -1.32	1e-6	■■■■■ 26.8
GTF2H3-212	ENST00000543341	BIK	Q13323	160 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	HEPACAM	Q14CZ8	416 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	RNASE12	Q5GAN4	147 aa	Known RBP	6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	SLC48A1	Q6P1K1	146 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	BHLHB9	Q6PI77	547 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	CEACAM20	Q6UY09	585 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	QSOX2	Q6ZRP7	698 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	ABHD13	Q7L211	337 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	CSNK1A1L	Q8N752	337 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	ACOT4	Q8N9L9	421 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	SLC38A9	Q8NBW4	561 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	KCT2	Q8NC54	265 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	PIP5K1A	Q99755	562 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	DPCD	Q9BVM2	203 aa	Predicted RBP	6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	NXF2	Q9GZY0	626 aa	Known RBP	6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	SIRT3	Q9NTG7	399 aa	Predicted RBP	6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	ACSS1	Q9NUB1	689 aa	Predicted RBP	6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	RDH8	Q9NYR8	311 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	ZNF226	Q9NYT6	803 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	H2AFY2	Q9P0M6	372 aa	Predicted RBP	6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	KLHL21	Q9UJP4	597 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	MGAT4A	Q9UM21	535 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	CLCA2	Q9UQC9	943 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	TRAPPC4	Q9Y296	219 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	FRY	Q5TBA9	3013 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	NCOR1	O75376	2440 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341		A0A1W2PR48	441 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	SSNA1	O43805	119 aa		6.8	□□□□□ -1.32
GTF2H3-212	ENST00000543341	C1QB	P02746	253 aa		6.8	□□□□□ -1.32

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms