RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 MICU2Q8IYU8 434 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 PDIK1LQ8N165 341 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CENPSQ8N2Z9 138 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 SLC43A2Q8N370 569 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 KIF2BQ8N4N8 673 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 KLHDC1Q8N7A1 406 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 ZNF614Q8N883 585 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 FNDC5Q8NAU1 212 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CATSPER1Q8NEC5 780 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 FAM71CQ8NEG0 241 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 BBS1Q8NFJ9 593 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 RNASE11Q8TAA1 199 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 UBA3Q8TBC4 463 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 PAQR8Q8TEZ7 354 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 SMAP2Q8WU79 429 aaPredicted RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 TNFRSF14Q92956 283 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 GLYATL1Q969I3 302 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 MARC2Q969Z3 335 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 ESAMQ96AP7 390 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 OTUB2Q96DC9 234 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 PIWIL1Q96J94 861 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 C9orf72Q96LT7 481 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 ZNF597Q96LX8 424 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 C10orf90Q96M02 699 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 NECTIN4Q96NY8 510 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CSPG4P5Q96PW8 444 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 KRT12Q99456 494 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 C12orf57Q99622 126 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 UBAC1Q9BSL1 405 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 ZSCAN5AQ9BUG6 496 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 MCRIP2Q9BUT9 160 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 KIFC1Q9BW19 673 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 DGCR6LQ9BY27 220 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 MROQ9BYG7 248 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 MRPS26Q9BYN8 205 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 NMNAT2Q9BZQ4 307 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 RACGAP1Q9H0H5 632 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 THAP2Q9H0W7 228 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 ALX4Q9H161 411 aaPredicted RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 SLC26A1Q9H2B4 701 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 GANQ9H2C0 597 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 PPA2Q9H2U2 334 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 DPEP2Q9H4A9 486 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 TMEM231Q9H6L2 316 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 NMUR1Q9HB89 426 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 FAM212BQ9NTI7 297 aaPredicted RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 AGPAT5Q9NUQ2 364 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 FAM120CQ9NX05 1096 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 RAB20Q9NX57 234 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 ELOVL2Q9NXB9 296 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 PSMC3IPQ9P2W1 217 aaPredicted RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 PPP1R3CQ9UQK1 317 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 SLC22A14Q9Y267 594 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 NCKAP1Q9Y2A7 1128 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 PPIL1Q9Y3C6 166 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 COLEC10Q9Y6Z7 277 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 V9GYQ6 96 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 PCF11O94913 1555 aaKnown RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 IQGAP2Q13576 1575 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ASXL1Q8IXJ9 1541 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 MYOM2P54296 1465 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 RGS12O14924 1447 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ADGRL3Q9HAR2 1447 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 A0A1W2PP64 1363 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 CEMIPQ8WUJ3 1361 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 RAB19A4D1S5 217 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 CCDC160A6NGH7 325 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ZNF729A6NN14 1252 aaPredicted RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 MEI4A8MW99 385 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 A8MXQ7 604 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 H3BMM5 538 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 EEF2KO00418 725 aaKnown RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 CCRL2O00421 344 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 DNALI1O14645 258 aaPredicted RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 TM9SF1O15321 606 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 AKR7A2O43488 359 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 EIF1BO60739 113 aaKnown RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 SCGB2A1O75556 95 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 CABYRO75952 493 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 NOL4O94818 638 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 SEC24AO95486 1093 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 LDOC1O95751 146 aaPredicted RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 AK1P00568 194 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 OAS1P00973 400 aaKnown RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 EPOP01588 193 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 APOA1P02647 267 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 IFNA4P05014 189 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ATP1B1P05026 303 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 S100A8P05109 93 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 FABP1P07148 127 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 PLEKP08567 350 aaPredicted RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 ANXA5P08758 320 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 NUDT17P0C025 328 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 OR4E1P0C645 316 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 STAG3L3P0CL85 134 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 SMIM6P0DI80 62 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 CT45A8P0DMV1 189 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 CT45A9P0DMV2 189 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 MLNP12872 115 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 DPEP1P16444 411 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms