RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PELI2Q9HAT8 420 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 SIDT1Q9NXL6 827 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 KCMF1Q9P0J7 381 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 WDR45Q9Y484 360 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 CEP290O15078 2479 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ARID1AO14497 2285 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 CASC3O15234 703 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRKNO60260 465 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 LDB3O75112 727 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 DHFRP00374 187 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ASGR2P07307 311 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 LAG3P18627 525 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 CSNK2A2P19784 350 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 DNASE1P24855 282 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 IFNGR2P38484 337 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 VEGFCP49767 419 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 UBE2MP61081 183 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 RPS15P62841 145 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 CAMK2DQ13557 499 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 CDONQ4KMG0 1287 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRPF38BQ5VTL8 546 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 CDC73Q6P1J9 531 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 MEPCEQ7L2J0 689 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 PTCHD1Q96NR3 888 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 SLC6A17Q9H1V8 727 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 DPAGT1Q9H3H5 408 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 MRPS30Q9NP92 439 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ISYNA1Q9NPH2 558 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ASB6Q9NWX5 421 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 KCNN3Q9UGI6 736 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ADAM30Q9UKF2 790 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 CES1P1Q9UKY3 287 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 RCE1Q9Y256 329 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 SDK1Q7Z5N4 2213 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ARHGEF17Q96PE2 2063 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 C17orf113A0A1B0GUU1 675 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 ACOD1A6NK06 481 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 CDK2AP1O14519 115 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 TSPAN4O14817 238 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 ADAM11O75078 769 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 EML2O95834 649 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRNPP04156 253 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 NPR2P20594 1047 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 MTNR1BP49286 362 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 SUZ12Q15022 739 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 GSG1Q2KHT4 349 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 SLC48A1Q6P1K1 146 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 BHLHB9Q6PI77 547 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRSS41Q7RTY9 318 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 FTMTQ8N4E7 242 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 SDR9C7Q8NEX9 313 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR52E1Q8NGJ3 308 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 LGALS14Q8TCE9 139 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 RIT1Q92963 219 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 CHFRQ96EP1 664 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 PGLYRP3Q96LB9 341 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 LINC00615Q96LM1 132 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 CAMK1GQ96NX5 476 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 TEAD3Q99594 435 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 FOLH1BQ9HBA9 442 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 TRIM36Q9NQ86 728 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 CA10Q9NS85 328 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 CLDND1Q9NY35 253 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 B3GNT2Q9NY97 397 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 KLK11Q9UBX7 282 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 UNC119BA6NIH7 251 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 BHLHE40O14503 412 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 EMC8O43402 210 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR7A10O76100 309 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 ADH1AP07327 375 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF888P0CJ79 500 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 ERGP11308 486 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 STAT5AP42229 794 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRR5P85299 388 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 FOXK2Q01167 660 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 SNTA1Q13424 505 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 RIN1Q13671 783 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 MELKQ14680 651 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 EXOSC7Q15024 291 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 DEFB134Q4QY38 66 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 SFRP5Q5T4F7 317 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 MRPL2Q5T653 305 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 FAAH2Q6GMR7 532 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF433Q8N7K0 673 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR8D1Q8WZ84 308 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF681Q96N22 645 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 KCNN2Q9H2S1 579 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 IL21RQ9HBE5 538 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 DLL4Q9NR61 685 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 SPATA2Q9UM82 520 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 GPR34Q9UPC5 381 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRELID1Q9Y255 219 aa9.6□□□□□ -0.87
CDC42SE1-207ENST00000540998 C7orf66A4D0T2 115 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 SMAD9O15198 467 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 TBX19O60806 448 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 TRIM3O75382 744 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 TPOP07202 933 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 UBL4AP11441 157 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 PLAURQ03405 335 aa9.59□□□□□ -0.87
CDC42SE1-207ENST00000540998 GNA13Q14344 377 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms