RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 TESQ9UGI8 421 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 FBXL2Q9UKC9 423 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 KLF13Q9Y2Y9 288 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 PCDHGB7Q9Y5F8 929 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 H0Y3Z8 333 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 FFAR1O14842 300 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 PEX1O43933 1283 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 MGRN1O60291 552 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 LINGO3P0C6S8 592 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ITGA2P17301 1181 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 FUT4P22083 530 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 MSX1P28360 303 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 PIN1Q13526 163 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TOMM34Q15785 309 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ENTPD8Q5MY95 495 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TIGD3Q6B0B8 471 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 FADS6Q8N9I5 356 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TOR1AIP2Q8NFQ8 470 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 OR1J4Q8NGS1 313 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 GPR119Q8TDV5 335 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 FAM173AQ9BQD7 235 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 YY1AP1Q9H869 796 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ZNF71Q9NQZ8 489 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 A4GNTQ9UNA3 340 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TP53TG5Q9Y2B4 290 aa17.21■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ANKUB1A6NFN9 424 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 LRRC3CA6NJW4 275 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 CPSF4LA6NMK7 179 aaKnown RBP17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 B8ZZF3 427 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 HNRNPRO43390 633 aaKnown RBP17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 FMO6PO60774 539 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 PRSS23O95084 383 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 NUDT14O95848 222 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 RHCEP18577 417 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 SLC6A8P48029 635 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 SUMO3P55854 103 aaPredicted RBP17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 FOXO1Q12778 655 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 RCN1Q15293 331 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 LILRA2Q8N149 483 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 TMEM178AQ8NBL3 297 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 OR4K17Q8NGC6 315 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 ADAMTS16Q8TE57 1224 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 LRTOMTQ8WZ04 291 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 ZNF597Q96LX8 424 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 GNRHR2Q96P88 292 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 ZNF559Q9BR84 538 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 ADNPQ9H2P0 1102 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 HHATLQ9HCP6 504 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 RHCGQ9UBD6 479 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 ACAD8Q9UKU7 415 aa17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 FAM32AQ9Y421 112 aaKnown RBP17.21■□□□□ 0.34
TNFRSF1A-213ENST00000540022 TRAV17A0A0B4J275 112 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 CST1P01037 141 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 PGCP20142 388 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 MST1P26927 711 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 IDH2P48735 452 aaKnown RBP17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 NFATC3Q12968 1075 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 CBFBQ13951 182 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 GANABQ14697 944 aaKnown RBP17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 OR1Q1Q15612 314 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 HMBOX1Q6NT76 420 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 PLEKHM3Q6ZWE6 761 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 ZNF605Q86T29 641 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 LSMEM1Q8N8F7 131 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 PRRC1Q96M27 445 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 ZNF347Q96SE7 839 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 PIP5K1AQ99755 562 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 PKP2Q99959 881 aa17.2■□□□□ 0.34
TNFRSF1A-213ENST00000540022 TNRC6AQ8NDV7 1962 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 KLRC4-KLRK1H3BQV0 150 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 FAAHO00519 579 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 CDC40O60508 579 aaKnown RBP eCLIP17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 THY1P04216 161 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 SFTPCP11686 197 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 FASP25445 335 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 ELAVL4P26378 380 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 MEOX1P50221 254 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 OR2T5Q6IEZ7 315 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 ARSKQ6UWY0 536 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 AMIGO2Q86SJ2 522 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 LSRQ86X29 649 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 CADM2Q8N3J6 435 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 RBMXL3Q8N7X1 1067 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 OR2T29Q8NH02 315 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 ZNF563Q8TA94 476 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 TRIM2Q9C040 744 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 SLC25A18Q9H1K4 315 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 TMEM27Q9HBJ8 222 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 ZFP64Q9NPA5 681 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 AGPAT4Q9NRZ5 378 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 VNN3Q9NY84 501 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 TESMINQ9Y4I5 508 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 PCDHGB6Q9Y5F9 930 aa17.19■□□□□ 0.34
TNFRSF1A-213ENST00000540022 A0A1B0GWA3 101 aa17.18■□□□□ 0.34
TNFRSF1A-213ENST00000540022 CLOCKO15516 846 aa17.18■□□□□ 0.34
TNFRSF1A-213ENST00000540022 CBR3O75828 277 aa17.18■□□□□ 0.34
TNFRSF1A-213ENST00000540022 RFPL3SP0C7P2 107 aa17.18■□□□□ 0.34
TNFRSF1A-213ENST00000540022 FCGR1AP12314 374 aa17.18■□□□□ 0.34
TNFRSF1A-213ENST00000540022 PLA2G2AP14555 144 aa17.18■□□□□ 0.34
TNFRSF1A-213ENST00000540022 TAS2R41P59536 307 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms