RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ZNF730Q6ZMV8 503 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 RRM2BQ7LG56 351 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 ZER1Q7Z7L7 766 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 TMCO5AQ8N6Q1 288 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 APCDD1LQ8NCL9 501 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 OR4C3Q8NH37 302 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 NUBPLQ8TB37 319 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 PIGXQ8TBF5 258 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 HPS1Q92902 700 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 PMEPA1Q969W9 287 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 DEPDC7Q96QD5 511 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 TAAR9Q96RI9 348 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 WDR77Q9BQA1 342 aaPredicted RBP15.53■□□□□ 0.08
COPS3-212ENST00000539941 TMEM27Q9HBJ8 222 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 KRCC1Q9NPI7 259 aaPredicted RBP15.53■□□□□ 0.08
COPS3-212ENST00000539941 B3GALT1Q9Y5Z6 326 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 SPTBN2O15020 2390 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 IGHV3-20A0A0C4DH32 117 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 SCDO00767 359 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 UTS2O95399 124 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 CSTAP01040 98 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 NGFRP08138 427 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 HPGDP15428 266 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 TBXA2RP21731 343 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 IL12BP29460 328 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 NR0B1P51843 470 aaKnown RBP15.52■□□□□ 0.08
COPS3-212ENST00000539941 LIMK1P53667 647 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 CRISP1P54107 249 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 PNLIPRP2P54317 469 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 FOXL2P58012 376 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 CXCR4P61073 352 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 FOXD4Q12950 439 aaPredicted RBP15.52■□□□□ 0.08
COPS3-212ENST00000539941 NCF4Q15080 339 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 C6orf183Q5T699 404 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 HSDL2Q6YN16 418 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 GLRX5Q86SX6 157 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 PIP4P1Q86T03 277 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 SLC7A5P1Q8MH63 180 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 DEPDC4Q8N2C3 294 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 LSMEM1Q8N8F7 131 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 FAM71CQ8NEG0 241 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 GNPDA2Q8TDQ7 276 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 ZNF566Q969W8 418 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 LMF1Q96S06 567 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 AKIRIN1Q9H9L7 192 aaPredicted RBP15.52■□□□□ 0.08
COPS3-212ENST00000539941 POLR1BQ9H9Y6 1135 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 REV1Q9UBZ9 1251 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 SLC7A7Q9UM01 511 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 NTNG1Q9Y2I2 539 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 PCDHGA6Q9Y5G7 932 aa15.52■□□□□ 0.08
COPS3-212ENST00000539941 KIF26BQ2KJY2 2108 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 LOC102723996A0A087X1L8 192 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 CCDC187A0A096LP49 1063 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 TSPAN2O60636 221 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 ABCB7O75027 752 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 BCAS1O75363 584 aaPredicted RBP15.51■□□□□ 0.07
COPS3-212ENST00000539941 CSO75390 466 aaKnown RBP15.51■□□□□ 0.07
COPS3-212ENST00000539941 MT-CO3P00414 261 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 THY1P04216 161 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 CCDC159P0C7I6 412 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 ITIH1P19827 911 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 ENDOUP21128 410 aaKnown RBP15.51■□□□□ 0.07
COPS3-212ENST00000539941 MMP11P24347 488 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 ELK4P28324 431 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 ACAA2P42765 397 aaKnown RBP15.51■□□□□ 0.07
COPS3-212ENST00000539941 HLCSP50747 726 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 CDH15P55291 814 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 PLCXD2Q0VAA5 305 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 CDK5R2Q13319 367 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 MEP1AQ16819 746 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 CTU2Q2VPK5 515 aaKnown RBP15.51■□□□□ 0.07
COPS3-212ENST00000539941 FNDC7Q5VTL7 733 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 MBOAT2Q6ZWT7 520 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 ANKRD13BQ86YJ7 626 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 RNF113BQ8IZP6 322 aaKnown RBP15.51■□□□□ 0.07
COPS3-212ENST00000539941 GALNT6Q8NCL4 622 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 OR13F1Q8NGS4 319 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 MED30Q96HR3 178 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 CPNE5Q9HCH3 593 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 EXOSC3Q9NQT5 275 aaKnown RBP15.51■□□□□ 0.07
COPS3-212ENST00000539941 PCDHGA3Q9Y5H0 932 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 NCOR2Q9Y618 2525 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 A0A0B4J2E0 115 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 A0A1B0GX12 115 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 A0A1W2PQD3 144 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 FAM172BPA6NC97 362 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 ZAR1LA6NP61 321 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 REM1O75628 298 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 STK17BO94768 372 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 JMJD7P0C870 316 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 CHMP24386 653 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 ETV5P41161 510 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 NRG3P56975 720 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 SLC26A5P58743 744 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 GABARAPL2P60520 117 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 TEKQ02763 1124 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 CDC20Q12834 499 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 MAD2L1BPQ15013 274 aaPredicted RBP15.51■□□□□ 0.07
COPS3-212ENST00000539941 PTGES3Q15185 160 aaKnown RBP15.51■□□□□ 0.07
COPS3-212ENST00000539941 SMUG1Q53HV7 270 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms