RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 GKN3PP0CG01 181 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 PEPDP12955 493 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 PRG2P13727 222 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 GABRA1P14867 456 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 IL7RP16871 459 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 COL8A1P27658 744 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 AQP1P29972 269 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 SUMO3P55854 103 aaPredicted RBP14.19□□□□□ -0.14
RPAIN-206ENST00000539417 PER3P56645 1201 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 SCARB2Q14108 478 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 MAPRE2Q15555 327 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 GLIPR1L2Q4G1C9 344 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 ADGRE4PQ86SQ3 457 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 PEX5LQ8IYB4 626 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 PM20D2Q8IYS1 436 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 C9orf106Q8NAJ2 232 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 TOR1AIP2Q8NFQ8 470 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 TNIP2Q8NFZ5 429 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 RP9Q8TA86 221 aaKnown RBP14.19□□□□□ -0.14
RPAIN-206ENST00000539417 ZBTB8AQ96BR9 441 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 ZNF845Q96IR2 970 aaPredicted RBP14.19□□□□□ -0.14
RPAIN-206ENST00000539417 TMEM38AQ9H6F2 299 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 THUMPD1Q9NXG2 353 aaKnown RBP14.19□□□□□ -0.14
RPAIN-206ENST00000539417 CALML5Q9NZT1 146 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 Q9UFV3 132 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 SLC35A3Q9Y2D2 325 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 HECTD1Q9ULT8 2610 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 NBPF19A0A087WUL8 3843 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 CDHR4A6H8M9 788 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 CLCA1A8K7I4 914 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 AIM2O14862 343 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 FRS3O43559 492 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 SHOX2O60902 331 aaPredicted RBP14.18□□□□□ -0.14
RPAIN-206ENST00000539417 ZNF17P17021 662 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 SESN3P58005 492 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 CBFBQ13951 182 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 BCL2A1Q16548 175 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 CTU2Q2VPK5 515 aaKnown RBP14.18□□□□□ -0.14
RPAIN-206ENST00000539417 REEP3Q6NUK4 255 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 NET1Q7Z628 596 aaPredicted RBP14.18□□□□□ -0.14
RPAIN-206ENST00000539417 CALHM3Q86XJ0 350 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 BBS10Q8TAM1 723 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 ZPLD1Q8TCW7 415 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 OIT3Q8WWZ8 545 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 SDCCAG3Q96C92 435 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 ADGRG7Q96K78 797 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 WFDC6Q9BQY6 131 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 MRGBPQ9NV56 204 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 ADAM21Q9UKJ8 722 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 CORO2BQ9UQ03 480 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 PTPN13Q12923 2485 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 ICE1Q9Y2F5 2266 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 A0A0J9YW62 118 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 C5orf58C9J3I9 102 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 ETV2O00321 342 aaPredicted RBP14.18□□□□□ -0.14
RPAIN-206ENST00000539417 TGM6O95932 706 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 PABPC4LP0CB38 370 aaKnown RBP14.18□□□□□ -0.14
RPAIN-206ENST00000539417 SLC6A2P23975 617 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 GRNP28799 593 aaKnown RBP14.18□□□□□ -0.14
RPAIN-206ENST00000539417 GCKP35557 465 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 CBX1P83916 185 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 HOXC5Q00444 222 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 CYP51A1Q16850 503 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 SLC25A53Q5H9E4 307 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 NSUN5P2Q63ZY6 315 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 POMZP3Q6PJE2 187 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 ZNF808Q8N4W9 903 aaPredicted RBP14.18□□□□□ -0.14
RPAIN-206ENST00000539417 ATP6V1C2Q8NEY4 427 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 OR10Q1Q8NGQ4 319 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 RND1Q92730 232 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 PMM1Q92871 262 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 DTNBP1Q96EV8 351 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 GPATCH1Q9BRR8 931 aaKnown RBP14.18□□□□□ -0.14
RPAIN-206ENST00000539417 UCK2Q9BZX2 261 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 EXOSC3Q9NQT5 275 aaKnown RBP14.18□□□□□ -0.14
RPAIN-206ENST00000539417 CMTM6Q9NX76 183 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 CLCF1Q9UBD9 225 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 ARL2BPQ9Y2Y0 163 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 GPC6Q9Y625 555 aaPredicted RBP14.18□□□□□ -0.14
RPAIN-206ENST00000539417 AP4B1Q9Y6B7 739 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 ADGRG4Q8IZF6 3080 aa14.18□□□□□ -0.14
RPAIN-206ENST00000539417 SPTAN1Q13813 2472 aaKnown RBP14.17□□□□□ -0.14
RPAIN-206ENST00000539417 TMEM247A6NEH6 219 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 CCT8L1PA6NM43 557 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 FAM47E-STBD1D6RA91 191 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 THBS1P07996 1170 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 SFTPDP35247 375 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 ACAA2P42765 397 aaKnown RBP14.17□□□□□ -0.14
RPAIN-206ENST00000539417 CPA2P48052 419 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 IDH2P48735 452 aaKnown RBP14.17□□□□□ -0.14
RPAIN-206ENST00000539417 AGFG1P52594 562 aaKnown RBP14.17□□□□□ -0.14
RPAIN-206ENST00000539417 CRYBA2P53672 197 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 PCBP3P57721 371 aaKnown RBP14.17□□□□□ -0.14
RPAIN-206ENST00000539417 DMTNQ08495 405 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 LIN52Q52LA3 116 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 ZNF311Q5JNZ3 666 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 PRAMEF8Q5VWM4 474 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 PRAMEF7Q5VXH5 474 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 TMEM211Q6ICI0 200 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms