RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 TBXA2RP21731 343 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 CASP3P42574 277 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 LIMS1P48059 325 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 RGS8P57771 180 aaPredicted RBP15.72■□□□□ 0.11
CLN6-202ENST00000538696 PLAURQ03405 335 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 EIPR1Q53HC9 387 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 ZNF766Q5HY98 468 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 PDZK1Q5T2W1 519 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 MRPL2Q5T653 305 aaKnown RBP15.72■□□□□ 0.11
CLN6-202ENST00000538696 RNF220Q5VTB9 566 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 SLC25A25Q6KCM7 469 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 Q6ZS92 163 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 CYP4Z1Q86W10 505 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 OR52J3Q8NH60 311 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 PHF10Q8WUB8 498 aaKnown RBP15.72■□□□□ 0.11
CLN6-202ENST00000538696 DHRS1Q96LJ7 313 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 RBM4BQ9BQ04 359 aaKnown RBP15.72■□□□□ 0.11
CLN6-202ENST00000538696 RBM4Q9BWF3 364 aaKnown RBP15.72■□□□□ 0.11
CLN6-202ENST00000538696 PRR14Q9BWN1 585 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 MFRPQ9BY79 579 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 HOXD1Q9GZZ0 328 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 GALNT9Q9HCQ5 603 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 KLHL1Q9NR64 748 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 DEPPQ9NTK1 212 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 KLHL28Q9NXS3 571 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 SMPD3Q9NY59 655 aaPredicted RBP15.72■□□□□ 0.11
CLN6-202ENST00000538696 KLRF1Q9NZS2 232 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 CNIH4Q9P003 139 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 ACAD8Q9UKU7 415 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 NTNG1Q9Y2I2 539 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 HRH3Q9Y5N1 445 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 PCNX3Q9H6A9 2034 aa15.72■□□□□ 0.11
CLN6-202ENST00000538696 CACNA1BQ00975 2339 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 A0A1W2PQD3 144 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 PINLYPA6NC86 204 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 C17orf51A8MQB3 221 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 ALG1L2C9J202 215 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 SCDO00767 359 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 TPST2O60704 377 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 GADD45GO95257 159 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 SNAP29O95721 258 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 THRBP10828 461 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 CD46P15529 392 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 GAS1P54826 345 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 HOXC5Q00444 222 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 FOXD4Q12950 439 aaPredicted RBP15.71■□□□□ 0.11
CLN6-202ENST00000538696 KLHL26Q53HC5 615 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 NHSL2Q5HYW2 709 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 GALNTL5Q7Z4T8 443 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 MARCH3Q86UD3 253 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 ZNF614Q8N883 585 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 GATSQ8NAP1 163 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 PIK3C3Q8NEB9 887 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 PRRC1Q96M27 445 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 ANGPTL4Q9BY76 406 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 CTPS2Q9NRF8 586 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 TMEFF2Q9UIK5 374 aaPredicted RBP15.71■□□□□ 0.11
CLN6-202ENST00000538696 HEATR5AQ86XA9 2040 aa15.71■□□□□ 0.11
CLN6-202ENST00000538696 TRBV4-1A0A0J9YWV2 114 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 ANKRD33BA6NCL7 494 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 MITFO75030 526 aaPredicted RBP15.7■□□□□ 0.1
CLN6-202ENST00000538696 H1F0P07305 194 aaKnown RBP15.7■□□□□ 0.1
CLN6-202ENST00000538696 DNASE1L1P49184 302 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 DAPP51397 102 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 ARHGDIAP52565 204 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 ZNF136P52737 540 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 GPR85P60893 370 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 SNTA1Q13424 505 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 PIN1Q13526 163 aaPredicted RBP15.7■□□□□ 0.1
CLN6-202ENST00000538696 ZNF169Q14929 603 aaPredicted RBP15.7■□□□□ 0.1
CLN6-202ENST00000538696 CD226Q15762 336 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 FNDC7Q5VTL7 733 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 SLC30A6Q6NXT4 461 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 ZNF527Q8NB42 609 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 TMEM178AQ8NBL3 297 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 OR10G2Q8NGC3 310 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 GIPC3Q8TF64 312 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 OIT3Q8WWZ8 545 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 CNOT9Q92600 299 aaKnown RBP15.7■□□□□ 0.1
CLN6-202ENST00000538696 ADI1Q9BV57 179 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 TBL1XR1Q9BZK7 514 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 NMNAT1Q9HAN9 279 aaPredicted RBP15.7■□□□□ 0.1
CLN6-202ENST00000538696 KLF13Q9Y2Y9 288 aaPredicted RBP15.7■□□□□ 0.1
CLN6-202ENST00000538696 WIF1Q9Y5W5 379 aa15.7■□□□□ 0.1
CLN6-202ENST00000538696 CDHR4A6H8M9 788 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 C2orf72A6NCS6 295 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 SERINC4A6NH21 518 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 CPSF4LA6NMK7 179 aaKnown RBP15.69■□□□□ 0.1
CLN6-202ENST00000538696 DENRO43583 198 aaKnown RBP15.69■□□□□ 0.1
CLN6-202ENST00000538696 ANGPTL1O95841 491 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 GKN3PP0CG01 181 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 PRG2P13727 222 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 HPGDP15428 266 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 CNR1P21554 472 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 HMGA2P52926 109 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 LY6DQ14210 128 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 FGFBP1Q14512 234 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 ZIK1Q3SY52 487 aaPredicted RBP15.69■□□□□ 0.1
CLN6-202ENST00000538696 NADK2Q4G0N4 442 aa15.69■□□□□ 0.1
CLN6-202ENST00000538696 FGD3Q5JSP0 725 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms