RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 LRRN3E7EW58 273 aa5□□□□□ -1.61
LRP6-203ENST00000538239 H3BSA7 217 aa5□□□□□ -1.61
LRP6-203ENST00000538239 CASC3O15234 703 aaKnown RBP5□□□□□ -1.61
LRP6-203ENST00000538239 TAPBPO15533 448 aa5□□□□□ -1.61
LRP6-203ENST00000538239 HCRTR1O43613 425 aa5□□□□□ -1.61
LRP6-203ENST00000538239 AP1G1O43747 822 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SLCO2B1O94956 709 aa5□□□□□ -1.61
LRP6-203ENST00000538239 TACR3P29371 465 aa5□□□□□ -1.61
LRP6-203ENST00000538239 RGS6P49758 472 aa5□□□□□ -1.61
LRP6-203ENST00000538239 LIM2P55344 173 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SRSF5Q13243 272 aaKnown RBP5□□□□□ -1.61
LRP6-203ENST00000538239 HYAL4Q2M3T9 481 aa5□□□□□ -1.61
LRP6-203ENST00000538239 ZBED5Q49AG3 693 aa5□□□□□ -1.61
LRP6-203ENST00000538239 HES5Q5TA89 166 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SLCO4C1Q6ZQN7 724 aa5□□□□□ -1.61
LRP6-203ENST00000538239 AAED1Q7RTV5 226 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SLC16A14Q7RTX9 510 aa5□□□□□ -1.61
LRP6-203ENST00000538239 PLPP6Q8IY26 295 aa5□□□□□ -1.61
LRP6-203ENST00000538239 POGLUT1Q8NBL1 392 aa5□□□□□ -1.61
LRP6-203ENST00000538239 LSM14AQ8ND56 463 aaKnown RBP5□□□□□ -1.61
LRP6-203ENST00000538239 KLHL15Q96M94 604 aa5□□□□□ -1.61
LRP6-203ENST00000538239 CCDC115Q96NT0 180 aa5□□□□□ -1.61
LRP6-203ENST00000538239 TMEM30AQ9NV96 361 aa5□□□□□ -1.61
LRP6-203ENST00000538239 UCKL1Q9NWZ5 548 aa5□□□□□ -1.61
LRP6-203ENST00000538239 ZNF226Q9NYT6 803 aa5□□□□□ -1.61
LRP6-203ENST00000538239 ABRACLQ9P1F3 81 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SEC14L4Q9UDX3 406 aa5□□□□□ -1.61
LRP6-203ENST00000538239 INTS6Q9UL03 887 aaKnown RBP5□□□□□ -1.61
LRP6-203ENST00000538239 FXYD6-FXYD2A0A087WZ82 144 aa5□□□□□ -1.61
LRP6-203ENST00000538239 KANTRA0A1W2PQU2 76 aa5□□□□□ -1.61
LRP6-203ENST00000538239 KRBA1A5PL33 1030 aa5□□□□□ -1.61
LRP6-203ENST00000538239 KLK10O43240 276 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SLC19A2O60779 497 aa5□□□□□ -1.61
LRP6-203ENST00000538239 PTHP01270 115 aa5□□□□□ -1.61
LRP6-203ENST00000538239 ANXA3P12429 323 aa5□□□□□ -1.61
LRP6-203ENST00000538239 HTR5AP47898 357 aa5□□□□□ -1.61
LRP6-203ENST00000538239 KCNJ10P78508 379 aa5□□□□□ -1.61
LRP6-203ENST00000538239 NKAIN1Q4KMZ8 207 aa5□□□□□ -1.61
LRP6-203ENST00000538239 AGBL4Q5VU57 503 aa5□□□□□ -1.61
LRP6-203ENST00000538239 Q6ZNB5 142 aa5□□□□□ -1.61
LRP6-203ENST00000538239 ZBTB8BQ8NAP8 495 aaPredicted RBP5□□□□□ -1.61
LRP6-203ENST00000538239 OR8H1Q8NGG4 311 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SGCZQ96LD1 299 aa5□□□□□ -1.61
LRP6-203ENST00000538239 PRRC1Q96M27 445 aa5□□□□□ -1.61
LRP6-203ENST00000538239 MS4A8Q9BY19 250 aa5□□□□□ -1.61
LRP6-203ENST00000538239 CRISPLD2Q9H0B8 497 aa5□□□□□ -1.61
LRP6-203ENST00000538239 FXYD6Q9H0Q3 95 aa5□□□□□ -1.61
LRP6-203ENST00000538239 DECR2Q9NUI1 292 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SCP2D1Q9UJQ7 156 aa5□□□□□ -1.61
LRP6-203ENST00000538239 CLCA1A8K7I4 914 aa5□□□□□ -1.61
LRP6-203ENST00000538239 ADAP00813 363 aa5□□□□□ -1.61
LRP6-203ENST00000538239 DBHP09172 617 aa5□□□□□ -1.61
LRP6-203ENST00000538239 BMP4P12644 408 aa5□□□□□ -1.61
LRP6-203ENST00000538239 MPLP40238 635 aa5□□□□□ -1.61
LRP6-203ENST00000538239 PFN3P60673 137 aa5□□□□□ -1.61
LRP6-203ENST00000538239 NKX3-2P78367 333 aa5□□□□□ -1.61
LRP6-203ENST00000538239 BLMHQ13867 455 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SLC5A12Q1EHB4 618 aa5□□□□□ -1.61
LRP6-203ENST00000538239 CNPY1Q3B7I2 92 aa5□□□□□ -1.61
LRP6-203ENST00000538239 VWA2Q5GFL6 755 aa5□□□□□ -1.61
LRP6-203ENST00000538239 EEF1AKMT2Q5JPI9 291 aaKnown RBP5□□□□□ -1.61
LRP6-203ENST00000538239 AGAP7PQ5VUJ5 663 aa5□□□□□ -1.61
LRP6-203ENST00000538239 TM4SF18Q96CE8 201 aa5□□□□□ -1.61
LRP6-203ENST00000538239 AGAP4Q96P64 663 aa5□□□□□ -1.61
LRP6-203ENST00000538239 EPHX3Q9H6B9 360 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SDR39U1Q9NRG7 319 aaPredicted RBP5□□□□□ -1.61
LRP6-203ENST00000538239 ZNF224Q9NZL3 707 aa5□□□□□ -1.61
LRP6-203ENST00000538239 GPR160Q9UJ42 338 aa5□□□□□ -1.61
LRP6-203ENST00000538239 ADAM29Q9UKF5 820 aa5□□□□□ -1.61
LRP6-203ENST00000538239 MMACHCQ9Y4U1 282 aa5□□□□□ -1.61
LRP6-203ENST00000538239 WIF1Q9Y5W5 379 aa5□□□□□ -1.61
LRP6-203ENST00000538239 H7C1C5 153 aa5□□□□□ -1.61
LRP6-203ENST00000538239 NRG2O14511 850 aaPredicted RBP5□□□□□ -1.61
LRP6-203ENST00000538239 FBXO45P0C2W1 286 aa5□□□□□ -1.61
LRP6-203ENST00000538239 GABRR1P24046 479 aa5□□□□□ -1.61
LRP6-203ENST00000538239 MAGEA3P43357 314 aa5□□□□□ -1.61
LRP6-203ENST00000538239 LCN6P62502 163 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SEMA3BQ13214 749 aa5□□□□□ -1.61
LRP6-203ENST00000538239 PYHIN1Q6K0P9 492 aa5□□□□□ -1.61
LRP6-203ENST00000538239 DTWD1Q8N5C7 304 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SLC2A12Q8TD20 617 aa5□□□□□ -1.61
LRP6-203ENST00000538239 ADAMTS16Q8TE57 1224 aa5□□□□□ -1.61
LRP6-203ENST00000538239 KHSRPQ92945 711 aaKnown RBP eCLIP5□□□□□ -1.61
LRP6-203ENST00000538239 INTS14Q96SY0 518 aa5□□□□□ -1.61
LRP6-203ENST00000538239 TSPAN10Q9H1Z9 355 aaPredicted RBP5□□□□□ -1.61
LRP6-203ENST00000538239 IL21Q9HBE4 155 aa5□□□□□ -1.61
LRP6-203ENST00000538239 AGPAT4Q9NRZ5 378 aa5□□□□□ -1.61
LRP6-203ENST00000538239 COQ3Q9NZJ6 369 aa5□□□□□ -1.61
LRP6-203ENST00000538239 OR14J1Q9UGF5 321 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SLC6A5Q9Y345 797 aa5□□□□□ -1.61
LRP6-203ENST00000538239 RBMX2Q9Y388 322 aaKnown RBP5□□□□□ -1.61
LRP6-203ENST00000538239 PCDHGB6Q9Y5F9 930 aa5□□□□□ -1.61
LRP6-203ENST00000538239 PRAMEF25A6NGN4 478 aa5□□□□□ -1.61
LRP6-203ENST00000538239 DIRAS3O95661 229 aa5□□□□□ -1.61
LRP6-203ENST00000538239 PITPNBP48739 271 aa5□□□□□ -1.61
LRP6-203ENST00000538239 C17orf67Q0P5P2 114 aa5□□□□□ -1.61
LRP6-203ENST00000538239 UGT8Q16880 541 aa5□□□□□ -1.61
LRP6-203ENST00000538239 LRRN1Q6UXK5 716 aa5□□□□□ -1.61
LRP6-203ENST00000538239 FAM57BQ71RH2 274 aa5□□□□□ -1.61
LRP6-203ENST00000538239 FAM217AQ8IXS0 508 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms