RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 CTBP2P56545 445 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 OR12D2P58182 307 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 PRKCDQ05655 676 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 SELENBP1Q13228 472 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 P2RY14Q15391 338 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 ARHGAP11BQ3KRB8 267 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 AGAP7PQ5VUJ5 663 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 CNIH2Q6PI25 160 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 OR2L13Q8N349 312 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 LINC00471Q8N535 108 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 ACBD7Q8N6N7 88 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 SLC37A3Q8NCC5 494 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 PHOSPHO1Q8TCT1 267 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 THAP3Q8WTV1 239 aaPredicted RBP8.06□□□□□ -1.12
UBE3B-208ENST00000538070 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.06□□□□□ -1.12
UBE3B-208ENST00000538070 DHRS1Q96LJ7 313 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF576Q9H609 170 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 A0A0B4J203 849 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 CCDC182A6NF36 153 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 C4orf47A7E2U8 309 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 GTPBP1O00178 669 aaKnown RBP8.06□□□□□ -1.12
UBE3B-208ENST00000538070 SYT5O00445 386 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 GABRPO00591 440 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 AKAP8O43823 692 aaKnown RBP8.06□□□□□ -1.12
UBE3B-208ENST00000538070 ADAM11O75078 769 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 OR5F1O95221 314 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 CSTAP01040 98 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 HMGN1P05114 100 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 IGHV4-34P06331 123 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 POU2F2P09086 479 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 TBXA2RP21731 343 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 MLLT3P42568 568 aaPredicted RBP8.06□□□□□ -1.12
UBE3B-208ENST00000538070 MAGEB1P43366 347 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 RABIFP47224 123 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 KCNJ8Q15842 424 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 DECR1Q16698 335 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF628Q5EBL2 1059 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF517Q6ZMY9 492 aaPredicted RBP8.06□□□□□ -1.12
UBE3B-208ENST00000538070 SAMD14Q8IZD0 417 aaPredicted RBP8.06□□□□□ -1.12
UBE3B-208ENST00000538070 KIAA1958Q8N8K9 716 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 OR4C3Q8NH37 302 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 ZFP3Q96NJ6 502 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 TTYH2Q9BSA4 534 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 FUZQ9BT04 418 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 LMAN1LQ9HAT1 526 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 PILRAQ9UKJ1 303 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 CBLCQ9ULV8 474 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 EXOSC1Q9Y3B2 195 aaKnown RBP8.06□□□□□ -1.12
UBE3B-208ENST00000538070 IER3IP1Q9Y5U9 82 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 NCOR1O75376 2440 aa8.06□□□□□ -1.12
UBE3B-208ENST00000538070 H7C1C5 153 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 PLOD3O60568 738 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 ZGLP1P0C6A0 271 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 MSL3P1P0C860 447 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 CHRNB1P11230 501 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 NID1P14543 1247 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 FPR3P25089 353 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 RPS27P42677 84 aaKnown RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 CSNK1EP49674 416 aaKnown RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 OR10A3P58181 314 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 LCN6P62502 163 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 FOXK2Q01167 660 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 SCN1BQ07699 218 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 FZD2Q14332 565 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 TUBA3EQ6PEY2 450 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 CCDC190Q86UF4 302 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF433Q8N7K0 673 aaPredicted RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 C4orf36Q96KX1 117 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 SPRTNQ9H040 489 aaPredicted RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 TESQ9UGI8 421 aaKnown RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 SIRT4Q9Y6E7 314 aaPredicted RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 FAM186AA6NE01 2351 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 FANCMQ8IYD8 2048 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 OR5K3A6NET4 321 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 ANKRD61A6NGH8 418 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 PEPDP12955 493 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 ERVK-25P63136 954 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 PSPHP78330 225 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 E2F1Q01094 437 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 PLK5Q496M5 336 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 C3orf38Q5JPI3 329 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 CEACAM19Q7Z692 300 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 RAB43Q86YS6 212 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 GJD3Q8N144 294 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 Q8N402 240 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 RCBTB1Q8NDN9 531 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 TSSK2Q96PF2 358 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 SDHCQ99643 169 aaPredicted RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 FOXQ1Q9C009 403 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 SLC7A5P2Q9GIP4 190 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 BEX1Q9HBH7 125 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 MMP17Q9ULZ9 603 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 WDFY4Q6ZS81 3184 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 RP1L1Q8IWN7 2480 aaPredicted RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 SHISA3A0PJX4 238 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 CDHR4A6H8M9 788 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 E9PQ18 207 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 CYR61O00622 381 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 CLDN4O14493 209 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms