RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CHST8Q9H2A9 424 aa7.96□□□□□ -1.14
SRGAP1-202ENST00000537556 MAN2C1Q9NTJ4 1040 aa7.96□□□□□ -1.14
SRGAP1-202ENST00000537556 ADAMTS5Q9UNA0 930 aa7.96□□□□□ -1.14
SRGAP1-202ENST00000537556 RUVBL1Q9Y265 456 aaKnown RBP7.96□□□□□ -1.14
SRGAP1-202ENST00000537556 SLC35A3Q9Y2D2 325 aa7.96□□□□□ -1.14
SRGAP1-202ENST00000537556 ALPK3Q96L96 1907 aa7.96□□□□□ -1.14
SRGAP1-202ENST00000537556 TRBV23OR9-2A0A075B6M9 112 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 OR10H2O60403 315 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 GCM2O75603 506 aaPredicted RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 F10P00742 488 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 C1QCP02747 245 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 SDC1P18827 310 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 AVPR2P30518 371 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 MAPK9P45984 424 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 GAS1P54826 345 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 NRG3P56975 720 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 NAE1Q13564 534 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 HMGN3Q15651 99 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 PTPRNQ16849 979 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 IMP4Q96G21 291 aaKnown RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 JAM3Q9BX67 310 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 SUCNR1Q9BXA5 334 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 UBQLN3Q9H347 655 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 SFXN1Q9H9B4 322 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 NMRK2Q9NPI5 230 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 RPS10P5Q9NQ39 176 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 MRPL15Q9P015 296 aaKnown RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 KLHL9Q9P2J3 617 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 SSC5DA1L4H1 1573 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 A0A0A6YYC8 382 aaPredicted RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 SEC14L6B5MCN3 397 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 GABARAPH6UMI1 98 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 I3L1I5 382 aaPredicted RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 FAAHO00519 579 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 MAN2B1O00754 1011 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 HOXA2O43364 376 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 RNF13O43567 381 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 B4GALT3O60512 393 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 SLC25A27O95847 323 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 C1SP09871 688 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 CLUP10909 449 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 PKMP14618 531 aaKnown RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 ZNF25P17030 456 aaPredicted RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 ACKR3P25106 362 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 SHC1P29353 583 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 RENBPP51606 427 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 PRKXP51817 358 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 RAP1AP62834 184 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 BDH1Q02338 343 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 GINS1Q14691 196 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 ADGRF1Q5T601 910 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 LINGO2Q7L985 606 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 PRSS45Q7RTY3 260 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 CCDC54Q8NEL0 328 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 SDR9C7Q8NEX9 313 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 OR8J2Q8NGG1 315 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 CSGALNACT1Q8TDX6 532 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 PAQR8Q8TEZ7 354 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 LCN9Q8WX39 176 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 MAFIPQ8WZ33 124 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 RFKQ969G6 155 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 TCTN2Q96GX1 697 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 ZNF75AQ96N20 296 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 GPR20Q99678 358 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 NDUFAF3Q9BU61 184 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 TKTL2Q9H0I9 626 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 FZD8Q9H461 694 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 PTGES2Q9H7Z7 377 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 ACKR4Q9NPB9 350 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 PRSS47A8MTI9 375 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 RTCAO00442 366 aaKnown RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 FFAR2O15552 330 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 YIF1AO95070 293 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 IGFBP1P08833 259 aaPredicted RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 OR8G3PP0DMU2 310 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 TXNP10599 105 aaKnown RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 CD79AP11912 226 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 C6P13671 934 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 COX7A2P14406 83 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 MYOGP15173 224 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 CSF2RAP15509 400 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 TACR1P25103 407 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 LSM6P62312 80 aaKnown RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 SRSF3P84103 164 aaKnown RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 SEMG2Q02383 582 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 TWF1Q12792 350 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 GAGE1Q13065 139 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 TTLL4Q14679 1199 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 TOMM34Q15785 309 aaPredicted RBP7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 NKPD1Q17RQ9 610 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 LINC00303Q3SY05 128 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 SIRPB2Q5JXA9 342 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 FAM46CQ5VWP2 391 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 OLFML2AQ68BL7 652 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 VRK3Q8IV63 474 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 ARHGAP12Q8IWW6 846 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 NPAS3Q8IXF0 933 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 OR10D4PQ8NGN7 298 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 BBS10Q8TAM1 723 aa7.95□□□□□ -1.14
SRGAP1-202ENST00000537556 CMTM7Q96FZ5 175 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms